RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SPDYE5A6NIY4 337 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 STK25O00506 426 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 SPDYE7PQ495Y7 208 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 FASTKD5Q7L8L6 764 aaKnown RBP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 RBM15Q96T37 977 aaKnown RBP eCLIP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 SERPINI2O75830 405 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 STX3Q13277 289 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 MTM1Q13496 603 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 MED21Q13503 144 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 C20orf96Q9NUD7 363 aaPredicted RBP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 RGL1Q9NZL6 768 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 AIM2O14862 343 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 WBP4O75554 376 aaKnown RBP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 CCZ1BP86790 482 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 CCZ1P86791 482 aaPredicted RBP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 TAP1Q03518 808 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 HAUS6Q7Z4H7 955 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 HOXC10Q9NYD6 342 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 SERPIND1P05546 499 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 RPS6P62753 249 aaKnown RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 PDAP1Q13442 181 aaKnown RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 DEPDC1Q5TB30 811 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 ENOSF1Q7L5Y1 443 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 ERP27Q96DN0 273 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 SH2D3AQ9BRG2 576 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 CD209Q9NNX6 404 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 RBM12Q9NTZ6 932 aaKnown RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 AGPAT5Q9NUQ2 364 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 DPYSL4O14531 572 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 BYSLQ13895 437 aaKnown RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 E4F1Q66K89 784 aaPredicted RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 IFNEQ86WN2 208 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 EME1Q96AY2 570 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 TMEM161AQ9NX61 479 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 NNMTP40261 264 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 ZNF467Q7Z7K2 595 aaPredicted RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 RCOR2Q8IZ40 523 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 MCEEQ96PE7 176 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 KLF6Q99612 283 aaPredicted RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 RANBP17Q9H2T7 1088 aaKnown RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 ABCA9Q8IUA7 1624 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 SKOR1P84550 965 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 BTKQ06187 659 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 LRRC74AQ0VAA2 488 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 AARS2Q5JTZ9 985 aaKnown RBP18.91■□□□□ 0.62
COL5A3-201ENST00000264828 V9GYQ6 96 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 MAP3K10Q02779 954 aa18.91■□□□□ 0.62
COL5A3-201ENST00000264828 CPB1P15086 417 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 YWHABP31946 246 aaKnown RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 SLC1A1P43005 524 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 C6orf10Q5SRN2 563 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 RINLQ6ZS11 566 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 MRPL1Q9BYD6 325 aaKnown RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 IL1RL2Q9HB29 575 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 SMG5Q9UPR3 1016 aaKnown RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 NEU2Q9Y3R4 380 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 TBC1D4O60343 1298 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 SRP72O76094 671 aaKnown RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 KLK7P49862 253 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 DUOXA2Q1HG44 320 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 TASP1Q9H6P5 420 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 FAM205CA6NFA0 338 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 GSG1L2A8MUP6 293 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 DEAF1O75398 565 aaPredicted RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 NBPF20Q3BBV1 942 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 STX19Q8N4C7 294 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 MMP19Q99542 508 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 RAB6BQ9NRW1 208 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 PSMC3IPQ9P2W1 217 aaPredicted RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 ZC3H7BQ9UGR2 993 aaKnown RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 XPO1O14980 1071 aaKnown RBP18.9■□□□□ 0.62
COL5A3-201ENST00000264828 LRIG3Q6UXM1 1119 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 CHMP2BQ9UQN3 213 aa18.9■□□□□ 0.62
COL5A3-201ENST00000264828 PPRC1Q5VV67 1664 aaKnown RBP18.89■□□□□ 0.62
COL5A3-201ENST00000264828 ARIH2O95376 493 aa18.89■□□□□ 0.62
COL5A3-201ENST00000264828 GALCP54803 685 aa18.89■□□□□ 0.62
COL5A3-201ENST00000264828 TTLL4Q14679 1199 aa18.89■□□□□ 0.62
COL5A3-201ENST00000264828 PDLIM2Q96JY6 352 aa18.89■□□□□ 0.62
COL5A3-201ENST00000264828 SENP1Q9P0U3 644 aa18.89■□□□□ 0.62
COL5A3-201ENST00000264828 ZBTB7AO95365 584 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 GRIK1P39086 918 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 FOXO4P98177 505 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 MFN1Q8IWA4 741 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 SRBD1Q8N5C6 995 aaKnown RBP18.89■□□□□ 0.61
COL5A3-201ENST00000264828 XPO6Q96QU8 1125 aaKnown RBP18.89■□□□□ 0.61
COL5A3-201ENST00000264828 ADGRA2Q96PE1 1338 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 RAD51CO43502 376 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 USP10Q14694 798 aaKnown RBP18.89■□□□□ 0.61
COL5A3-201ENST00000264828 F5H6K3 240 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 ATMINO43313 823 aaPredicted RBP18.89■□□□□ 0.61
COL5A3-201ENST00000264828 KRT8P05787 483 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 KLRC3Q07444 240 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 PTK7Q13308 1070 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 MTHFD1LQ6UB35 978 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 RUBCNQ92622 972 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 EFCAB14O75071 495 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 SLC18A3Q16572 532 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 DNAL1Q4LDG9 190 aa18.89■□□□□ 0.61
COL5A3-201ENST00000264828 ACOT2P49753 483 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms