RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 BMPR1AP36894 532 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 PBX3P40426 434 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 ACOT2P49753 483 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 YARSP54577 528 aaKnown RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 GRIK3Q13003 919 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 PAK1Q13153 545 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 GRIN2CQ14957 1233 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 NAB2Q15742 525 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 EPC2Q52LR7 807 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 GLRA4Q5JXX5 417 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 SPOUT1Q5T280 376 aaKnown RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 GAS2L3Q86XJ1 694 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 ZMAT2Q96NC0 199 aaKnown RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 SAMD11Q96NU1 681 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 RPS6KC1Q96S38 1066 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 GAS2L1Q99501 681 aaPredicted RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 TOPORSQ9NS56 1045 aaPredicted RBP12.57□□□□□ -0.4
PFDN1-201ENST00000261813 DNAJB4Q9UDY4 337 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 RWDD2AQ9UIY3 292 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 NLRC5Q86WI3 1866 aa12.57□□□□□ -0.4
PFDN1-201ENST00000261813 GOLGA8IPA6NC78 632 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 C5orf67F2Z3F1 127 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 RFXAPO00287 272 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 ZC3H11AO75152 810 aaKnown RBP eCLIP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 LAG3P18627 525 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PRCPP42785 496 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 SNRPFP62306 86 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 MYL5Q02045 173 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 RNASELQ05823 741 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 DSC1Q08554 894 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 KYAT1Q16773 422 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 HS2ST1Q7LGA3 356 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 COLGALT2Q8IYK4 626 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 NOC3LQ8WTT2 800 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PPP1R10Q96QC0 940 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 TSG101Q99816 390 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 FAM213AQ9BRX8 229 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 RBSNQ9H1K0 784 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CBX8Q9HC52 389 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CNTN3Q9P232 1028 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 RWDD3Q9Y3V2 267 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 SPTBN5Q9NRC6 3674 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 COL4A4P53420 1690 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 TTC26A0AVF1 554 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 NT5C1B-RDH14C9J2C7 533 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 TNFRSF10AO00220 468 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PDXKO00764 312 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 EXTL3O43909 919 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 LDHAP00338 332 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 THP07101 528 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 ADRB2P07550 413 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 GALTP07902 379 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 KCNE1P15382 129 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CCNE1P24864 410 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 SLC11A1P49279 550 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CYP2J2P51589 502 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 WNT7BP56706 349 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 BCAR1P56945 870 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 LRRC63Q05C16 580 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 TPD52L1Q16890 204 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 SPATA1Q5VX52 437 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 C11orf57Q6ZUT1 292 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 C12orf56Q8IXR9 622 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 GPD1LQ8N335 351 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 KLHL23Q8NBE8 558 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 GOLGA5Q8TBA6 731 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 GDPD5Q8WTR4 605 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 ZNF558Q96NG5 402 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 FAM193BQ96PV7 902 aaPredicted RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 TMEM175Q9BSA9 504 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PRR14Q9BWN1 585 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PLVAPQ9BX97 442 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PRDM12Q9H4Q4 367 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 RPF1Q9H9Y2 349 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PLEKHA5Q9HAU0 1116 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 AAASQ9NRG9 546 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CGNQ9P2M7 1197 aaKnown RBP12.56□□□□□ -0.4
PFDN1-201ENST00000261813 CACNG4Q9UBN1 327 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 TRAF3IP3Q9Y228 551 aa12.56□□□□□ -0.4
PFDN1-201ENST00000261813 PRUNE2Q8WUY3 3088 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 LACTBL1A8MY62 500 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 H3BNC9 293 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 KIAA0391O15091 583 aaKnown RBP12.55□□□□□ -0.4
PFDN1-201ENST00000261813 LPXNO60711 386 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 RB1P06400 928 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
PFDN1-201ENST00000261813 PPP2R3AQ06190 1150 aa12.55□□□□□ -0.4
PFDN1-201ENST00000261813 SOX4Q06945 474 aaPredicted RBP12.55□□□□□ -0.4
PFDN1-201ENST00000261813 SPAG1Q07617 926 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms