RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 MDM1Q8TC05 714 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 C19orf60Q96EN9 201 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 OVOS2A0A0G2JMS6 1433 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 AP3B1O00203 1094 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 TRIM24O15164 1050 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 CPDO75976 1380 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 SMARCA1P28370 1054 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 CDK7P50613 346 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ALDH18A1P54886 795 aaKnown RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 PDIA2Q13087 525 aaKnown RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 CMPK2Q5EBM0 449 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 NT5DC1Q5TFE4 455 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ARMC3Q5W041 872 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 LVRNQ6Q4G3 990 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 TRIM67Q6ZTA4 783 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 RAPH1Q70E73 1250 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 TMC3Q7Z5M5 1100 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ERICH1Q86X53 443 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 NCAPG2Q86XI2 1143 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 DDX42Q86XP3 938 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 TRIM50Q86XT4 487 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 PPM1KQ8N3J5 372 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 GRPEL2Q8TAA5 225 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 ZNF564Q8TBZ8 553 aaPredicted RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 GDPD5Q8WTR4 605 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 PALLDQ8WX93 1383 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 HEY2Q9UBP5 337 aa8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 DBR1Q9UK59 544 aaKnown RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 RTCBQ9Y3I0 505 aaKnown RBP8.76□□□□□ -1.01
SNCAIP-201ENST00000261367 F8W8V4 182 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 MED7O43513 233 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 RTN2O75298 545 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 SOX5P35711 763 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CYP2J2P51589 502 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 HSPA2P54652 639 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 GEMIN4P57678 1058 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 ZNF846Q147U1 533 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 MEI1Q5TIA1 1274 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 TTBK2Q6IQ55 1244 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 DARS2Q6PI48 645 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 C7orf25Q9BPX7 421 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 UBXN6Q9BZV1 441 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CACYBPQ9HB71 228 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 SLC38A10Q9HBR0 1119 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 MLXIPLQ9NP71 852 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PLK2Q9NYY3 685 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PHF8Q9UPP1 1060 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 HMGB3O15347 200 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PDE9AO76083 593 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 SRP72O76094 671 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PAEPP09466 180 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 NUDT17P0C025 328 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 TTC39BQ5VTQ0 682 aaPredicted RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 KRT26Q7Z3Y9 468 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 LRRN4CLQ8ND94 238 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 ECSITQ9BQ95 431 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 TIPINQ9BVW5 301 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CYP4F11Q9HBI6 524 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 AFG3L2Q9Y4W6 797 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 UMODL1Q5DID0 1318 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 IGSF1Q8N6C5 1336 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CALB1P05937 261 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 SRGAP2CP0DJJ0 459 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CCDC130P13994 396 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 IL12AP29459 219 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 STX5Q13190 355 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 ACVR2BQ13705 512 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 DNAJC24Q6P3W2 148 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 HDDC2Q7Z4H3 204 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 ZCCHC7Q8N3Z6 543 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 MIGA1Q8NAN2 632 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 DQX1Q8TE96 717 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CKAP2Q8WWK9 683 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 E2F7Q96AV8 911 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 MS4A14Q96JA4 679 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 RBM15Q96T37 977 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 FBXO28Q9NVF7 368 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 IP6K2Q9UHH9 426 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 TBX22Q9Y458 520 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 APOA4P06727 396 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 LPIN1Q14693 890 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 ZBED8Q8IZ13 594 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 FNIP1Q8TF40 1166 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 NAT14Q8WUY8 206 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 MCRS1Q96EZ8 462 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 CCDC90BQ9GZT6 254 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 C6orf203Q9P0P8 240 aaPredicted RBP8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 DNAJB4Q9UDY4 337 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 SOX13Q9UN79 622 aa8.75□□□□□ -1.01
SNCAIP-201ENST00000261367 DNALI1O14645 258 aaPredicted RBP8.74□□□□□ -1.01
SNCAIP-201ENST00000261367 BACH1O14867 736 aa8.74□□□□□ -1.01
SNCAIP-201ENST00000261367 ALBP02768 609 aa8.74□□□□□ -1.01
SNCAIP-201ENST00000261367 ALADP13716 330 aa8.74□□□□□ -1.01
SNCAIP-201ENST00000261367 MAGEA4P43358 317 aa8.74□□□□□ -1.01
SNCAIP-201ENST00000261367 HERVK_113P62684 666 aa8.74□□□□□ -1.01
SNCAIP-201ENST00000261367 OCRLQ01968 901 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms