RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 UTP11Q9Y3A2 253 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 TTLL3Q9Y4R7 772 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 EYSQ5T1H1 3165 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 GOLGA6L10A0A0M3HER8 536 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 CCDC78A2IDD5 438 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 CCDC172P0C7W6 258 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 MAPTP10636 758 aaKnown RBP9.71□□□□□ -0.85
CKAP2-201ENST00000258607 NT5C2P49902 561 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 FMO1Q01740 532 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 PPP6R3Q5H9R7 873 aaPredicted RBP9.71□□□□□ -0.85
CKAP2-201ENST00000258607 FAXCQ5TGI0 409 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 ZC3H18Q86VM9 953 aaKnown RBP9.71□□□□□ -0.85
CKAP2-201ENST00000258607 SMAP1Q8IYB5 467 aaPredicted RBP9.71□□□□□ -0.85
CKAP2-201ENST00000258607 GOLGA5Q8TBA6 731 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 GPRASP2Q96D09 838 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 NGRNQ9NPE2 291 aaKnown RBP9.71□□□□□ -0.85
CKAP2-201ENST00000258607 CHST7Q9NS84 486 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 AGAP1Q9UPQ3 857 aa9.71□□□□□ -0.85
CKAP2-201ENST00000258607 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.71□□□□□ -0.85
CKAP2-201ENST00000258607 SYNGAP1Q96PV0 1343 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 F8VP50 259 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 SLC16A3O15427 465 aaKnown RBP9.71□□□□□ -0.86
CKAP2-201ENST00000258607 C6orf222P0C671 652 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-201ENST00000258607 IQCF3P0C7M6 154 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ADORA2BP29275 332 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ADCY8P40145 1251 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 IFI16Q16666 785 aaKnown RBP9.71□□□□□ -0.86
CKAP2-201ENST00000258607 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF148Q9UQR1 794 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 DAAM1Q9Y4D1 1078 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ARFGEF1Q9Y6D6 1849 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ANO9A1A5B4 782 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 BTBD19C9JJ37 291 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 I3L4J1 428 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 RALAP11233 206 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 CHRNB2P17787 502 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF157P51786 506 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-201ENST00000258607 ZNF131P52739 623 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 HTRA3P83110 453 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 GTF2BQ00403 316 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 FAM160B1Q5W0V3 765 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 CCDC137Q6PK04 289 aaKnown RBP9.71□□□□□ -0.86
CKAP2-201ENST00000258607 CATSPER4Q7RTX7 472 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 MAP4K3Q8IVH8 894 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 STKLD1Q8NE28 680 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 LMBR1Q8WVP7 490 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 CEP41Q9BYV8 373 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 SMYD3Q9H7B4 428 aa9.71□□□□□ -0.86
CKAP2-201ENST00000258607 SPATA31C2B4DYI2 1134 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 PGK1P00558 417 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 ACAT1P24752 427 aaKnown RBP9.7□□□□□ -0.86
CKAP2-201ENST00000258607 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
CKAP2-201ENST00000258607 PAK2Q13177 524 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 UBL4BQ8N7F7 174 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 MTMR14Q8NCE2 650 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 FAM149B1Q96BN6 582 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.7□□□□□ -0.86
CKAP2-201ENST00000258607 CDHR5Q9HBB8 845 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 KCND1Q9NSA2 647 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 R3HDM2Q9Y2K5 976 aaKnown RBP9.7□□□□□ -0.86
CKAP2-201ENST00000258607 SIPA1L1O43166 1804 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 MYPNQ86TC9 1320 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 ANKRD62A6NC57 917 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 PPEF2O14830 753 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 SHBGP04278 402 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 ATF7IP2Q5U623 682 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 TXLNBQ8N3L3 684 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 REPS2Q8NFH8 660 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 BORCS6Q96GS4 357 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 CDHR1Q96JP9 859 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 MAGEB5Q9BZ81 275 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 TMEM8AQ9HCN3 771 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 CTNNAL1Q9UBT7 734 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 LCMT1Q9UIC8 334 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 HEY1Q9Y5J3 304 aa9.7□□□□□ -0.86
CKAP2-201ENST00000258607 MYH9P35579 1960 aaKnown RBP9.7□□□□□ -0.86
CKAP2-201ENST00000258607 E2F8A0AVK6 867 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 E7EVH7 732 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 POC1B-GALNT4F8VUJ3 575 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 OSBPP22059 807 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 IGFBP6P24592 240 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 ERFP50548 548 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 NEDD9Q14511 834 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 TAF5Q15542 800 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 SH3PXD2AQ5TCZ1 1133 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 MSANTD4Q8NCY6 345 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 OR6B3Q8NGW1 331 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 GDAP1Q8TB36 358 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 DYDC1Q8WWB3 177 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 KIF12Q96FN5 646 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 HERPUD2Q9BSE4 406 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 BZW2Q9Y6E2 419 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 H3BRB1 525 aa9.69□□□□□ -0.86
CKAP2-201ENST00000258607 SYF2O95926 243 aaKnown RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 F7P08709 466 aaPredicted RBP9.69□□□□□ -0.86
CKAP2-201ENST00000258607 HNRNPH3P31942 346 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms