RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 GRAMD1AQ96CP6 724 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 KDM4CQ9H3R0 1056 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 AS3MTQ9HBK9 375 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 UVRAGQ9P2Y5 699 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SUGT1Q9Y2Z0 365 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 C5P01031 1676 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 GRAP2O75791 330 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SLC12A2P55011 1212 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ART3Q13508 389 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TRIM72Q6ZMU5 477 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 AGGF1Q8N302 714 aaeCLIP4.88□□□□□ -1.631e-8■■■■■ 43.4
VPS13C-201ENST00000249837 CCDC33Q8N5R6 958 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 DDX27Q96GQ7 796 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TTC25Q96NG3 672 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FGFBP2Q9BYJ0 223 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CYP4F11Q9HBI6 524 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 STOML1Q9UBI4 398 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 KIAA0391O15091 583 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CDH16O75309 829 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ECE1P42892 770 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 KIF22Q14807 665 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 HIF1AQ16665 826 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SH2D4BQ5SQS7 431 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TMEM154Q6P9G4 183 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PCGF5Q86SE9 256 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 NOP9Q86U38 636 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ARHGEF19Q8IW93 802 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TARS2Q9BW92 718 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 DDX4Q9NQI0 724 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 IP6K2Q9UHH9 426 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 HAO1Q9UJM8 370 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 IQANK1A0A1B0GTG1 560 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 MYBL1P10243 752 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PTENP60484 403 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TFDP2Q14188 446 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CYP4A22Q5TCH4 519 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FOXO6A8MYZ6 492 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 NOL4O94818 638 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 LMNAP02545 664 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 KRT7P08729 469 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 CPA2P48052 419 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 COPS2P61201 443 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 KCNJ2P63252 427 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SEZ6Q53EL9 994 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 IQCKQ8N0W5 287 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PIP4K2CQ8TBX8 421 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 NUP98P52948 1817 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 A0A0A6YYK5 440 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 TARSP26639 723 aaKnown RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 ITIH4Q14624 930 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SPOPLQ6IQ16 392 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PRCCQ92733 491 aaPredicted RBP4.88□□□□□ -1.63
VPS13C-201ENST00000249837 FIS1Q9Y3D6 152 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 PCDHGC5Q9Y5F6 944 aa4.88□□□□□ -1.63
VPS13C-201ENST00000249837 SPEF2Q9C093 1822 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 AGPSO00116 658 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ENO1P06733 434 aaKnown RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 PDE1CQ14123 709 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 TKFCQ3LXA3 575 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 EAPPQ56P03 285 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 NUDCD3Q8IVD9 361 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 MSL3Q8N5Y2 521 aaKnown RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 PRPF38AQ8NAV1 312 aaKnown RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 TMEM8AQ9HCN3 771 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 CAPN9O14815 690 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 SKAP2O75563 359 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 HSPA4LO95757 839 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 GARSP41250 739 aaKnown RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 PLCB4Q15147 1175 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 NPY5RQ15761 445 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 HHIPL2Q6UWX4 724 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 TRPC5Q9UL62 973 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 MAP1BP46821 2468 aaKnown RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 DDTLA6NHG4 134 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ZWINTO95229 277 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ASNSP08243 561 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 WEE2P0C1S8 567 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 MAP7Q14244 749 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 TMCO4Q5TGY1 634 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ARHGAP27Q6ZUM4 889 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 PODNQ7Z5L7 613 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 CD302Q8IX05 232 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 AFAP1L2Q8N4X5 818 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ALG3Q92685 438 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 PRMT6Q96LA8 375 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF302Q9NR11 478 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 WHRNQ9P202 907 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 TRAPPC3O43617 180 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 LPXNO60711 386 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 GSTA1P08263 222 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 GSTA2P09210 222 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ALDH5A1P51649 535 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 SESN2P58004 480 aaPredicted RBP4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ITKQ08881 620 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 NCOA4Q13772 614 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF720Q7Z2F6 126 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 SLC5A5Q92911 643 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 MIS12Q9H081 205 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 HEY2Q9UBP5 337 aa4.87□□□□□ -1.63
VPS13C-201ENST00000249837 PCDHA10Q9Y5I2 948 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms