RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 C18orf25Q96B23 403 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-201ENST00000243040 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
PFDN5-201ENST00000243040 FBXL18Q96ME1 805 aa11.55□□□□□ -0.56
PFDN5-201ENST00000243040 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
PFDN5-201ENST00000243040 RXFP1Q9HBX9 757 aa11.55□□□□□ -0.56
PFDN5-201ENST00000243040 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.55□□□□□ -0.567e-10■■□□□ 12.3
PFDN5-201ENST00000243040 MRPL17Q9NRX2 175 aaKnown RBP11.55□□□□□ -0.56
PFDN5-201ENST00000243040 AGPAT3Q9NRZ7 376 aa11.55□□□□□ -0.56
PFDN5-201ENST00000243040 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
PFDN5-201ENST00000243040 DENND4AQ7Z401 1863 aa11.55□□□□□ -0.56
PFDN5-201ENST00000243040 PER2O15055 1255 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 CLASP2O75122 1294 aaKnown RBP11.54□□□□□ -0.56
PFDN5-201ENST00000243040 GADD45BO75293 160 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-201ENST00000243040 B3GAT3O94766 335 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 SRGAP2BP0DMP2 458 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 KCNA5P22460 613 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 CREMQ03060 361 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TFF2Q03403 129 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TMEM132DQ14C87 1099 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 KNOP1Q1ED39 458 aaKnown RBP11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 RTP2Q5QGT7 225 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 SPATA1Q5VX52 437 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 JADE1Q6IE81 842 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-201ENST00000243040 HS2ST1Q7LGA3 356 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TAS1R1Q7RTX1 841 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 PPFIBP1Q86W92 1011 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 NELFCDQ8IXH7 590 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 ZSWIM2Q8NEG5 633 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 SPATA20Q8TB22 786 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 SAAL1Q96ER3 474 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 MSLNLQ96KJ4 702 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 KLHL5Q96PQ7 755 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 ASB2Q96Q27 587 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 FAM213AQ9BRX8 229 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 EMILIN2Q9BXX0 1053 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 KIAA1586Q9HCI6 787 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 RBAKQ9NYW8 714 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-201ENST00000243040 HSPBP1Q9NZL4 362 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 FNIP2Q9P278 1114 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 C2orf16Q68DN1 1984 aa11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TCF20Q9UGU0 1960 aaKnown RBP11.54□□□□□ -0.56
PFDN5-201ENST00000243040 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 KIF20AO95235 890 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 C1RP00736 705 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 NFICP08651 508 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 CNPP09543 421 aaKnown RBP11.53□□□□□ -0.56
PFDN5-201ENST00000243040 FGFR3P22607 806 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 CA8P35219 290 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 AARSP49588 968 aaKnown RBP eCLIP11.53□□□□□ -0.56
PFDN5-201ENST00000243040 NDUFV1P49821 464 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 UBE2HP62256 183 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 SPAG1Q07617 926 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-201ENST00000243040 PNOCQ13519 176 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 PUS10Q3MIT2 529 aaKnown RBP11.53□□□□□ -0.56
PFDN5-201ENST00000243040 FAM171A1Q5VUB5 890 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 PDXDC1Q6P996 788 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 BEST2Q8NFU1 509 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 GOLGA5Q8TBA6 731 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 CASP10Q92851 521 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 GSDMAQ96QA5 445 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 TTPALQ9BTX7 342 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 KCTD10Q9H3F6 313 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 PCIF1Q9H4Z3 704 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 CLEC1BQ9P126 229 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 HOOK1Q9UJC3 728 aaKnown RBP11.53□□□□□ -0.56
PFDN5-201ENST00000243040 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
PFDN5-201ENST00000243040 ANO9A1A5B4 782 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 GOLGA8IPA6NC78 632 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 GOLGA8JA6NMD2 632 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 H3BQ06 376 aaPredicted RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 PDXKO00764 312 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 C2CD2LO14523 706 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 SYN3O14994 580 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 ADH1AP07327 375 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 PAX3P23760 479 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 IGFBP6P24592 240 aaPredicted RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 BRCC3P46736 316 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 CLCN4P51793 760 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 WNT7BP56706 349 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 SMAD4Q13485 552 aaKnown RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 NFIL3Q16649 462 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 KIAA1841Q6NSI8 718 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 GUF1Q8N442 669 aaKnown RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 XXYLT1Q8NBI6 393 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 SMRP1Q8NCR6 262 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 LNX1Q8TBB1 728 aaPredicted RBP11.52□□□□□ -0.57
PFDN5-201ENST00000243040 SLC22A17Q8WUG5 538 aa11.52□□□□□ -0.57
PFDN5-201ENST00000243040 RIN2Q8WYP3 895 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms