RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 STX3Q13277 289 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 CCDC85BQ15834 202 aaPredicted RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 SNRNP35Q16560 246 aaKnown RBP14.08□□□□□ -0.16
NEK4-201ENST00000233027 SMTNL2Q2TAL5 461 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 EPC2Q52LR7 807 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 LVRNQ6Q4G3 990 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 FBXO40Q9UH90 709 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 PNMA3Q9UL41 463 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 CRB1P82279 1406 aa14.08□□□□□ -0.16
NEK4-201ENST00000233027 FLT1P17948 1338 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 KCNA3P22001 575 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 ACTR2P61160 394 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 ARHGAP18Q8N392 663 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 RANBP17Q9H2T7 1088 aaKnown RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 JPH1Q9HDC5 661 aaPredicted RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 SLC40A1Q9NP59 571 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 MTMR4Q9NYA4 1195 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 SENP1Q9P0U3 644 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 KLRC1P26715 233 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 TPI1P60174 286 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 KYNUQ16719 465 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 PPHLN1Q8NEY8 458 aaKnown RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 ELMO2Q96JJ3 720 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 F8W8V4 182 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 UBTFL6P0CB48 400 aaPredicted RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 ZNF200P98182 395 aaPredicted RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 NYAP1Q6ZVC0 841 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 ACSF2Q96CM8 615 aaPredicted RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 RMDN1Q96DB5 314 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 PI4K2AQ9BTU6 479 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 PLEKHA5Q9HAU0 1116 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 IGF2BP3O00425 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
NEK4-201ENST00000233027 PJA2O43164 708 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 CPA2P48052 419 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 PODNQ7Z5L7 613 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 GALNT4Q8N4A0 578 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 RBBP8NLQ8NC74 664 aaPredicted RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 UVRAGQ9P2Y5 699 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 DGKIO75912 1065 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 GNL1P36915 607 aaPredicted RBP14.07□□□□□ -0.16
NEK4-201ENST00000233027 ZNF543Q08ER8 600 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 MAPRE2Q15555 327 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 REXO1L1PQ8IX06 675 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 CD248Q9HCU0 757 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 DONSONQ9NYP3 566 aa14.07□□□□□ -0.16
NEK4-201ENST00000233027 GTPBP10A4D1E9 387 aaKnown RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 CDH16O75309 829 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 HNRNPCP07910 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
NEK4-201ENST00000233027 VCPP55072 806 aaKnown RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 PTGISQ16647 500 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ZC3H12BQ5HYM0 836 aaKnown RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 CASKIN2Q8WXE0 1202 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ARHGEF26Q96DR7 871 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ASPSCR1Q9BZE9 553 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ISCUQ9H1K1 167 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 A0A1W2PQJ5 194 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 AKAP10O43572 662 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 SYF2O95926 243 aaKnown RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 GNAT1P11488 350 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 MAGEA4P43358 317 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 HDAC4P56524 1084 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ACCSLQ4AC99 568 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 BARGINQ6ZT62 677 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 TTC30AQ86WT1 665 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ZNF710Q8N1W2 664 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 AGGF1Q8N302 714 aaeCLIP14.06□□□□□ -0.16
NEK4-201ENST00000233027 MAD2L2Q9UI95 211 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 AGAP1Q9UPQ3 857 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ABCA6Q8N139 1617 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 AIM2O14862 343 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ZSCAN9O15535 394 aaPredicted RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 ERVK-24P63145 666 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 BTBD8Q5XKL5 378 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 C3orf62Q6ZUJ4 267 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 CNTNAP5Q8WYK1 1306 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 MADDQ8WXG6 1647 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 UBE2Q2LH0YL09 131 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 ANGPT2O15123 496 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 GFAPP14136 432 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 RECQLP46063 649 aaPredicted RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 PCYT1AP49585 367 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 KCNQ2O43526 872 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 PDGFRAP16234 1089 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 HSD17B3P37058 310 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 AP3M2P53677 418 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 MTMR2Q13614 643 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 NCOA4Q13772 614 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 SLC29A2Q14542 456 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 CYGBQ8WWM9 190 aa14.06□□□□□ -0.16
NEK4-201ENST00000233027 PRDM5Q9NQX1 630 aaPredicted RBP14.06□□□□□ -0.16
NEK4-201ENST00000233027 KRT4P19013 534 aa14.05□□□□□ -0.16
NEK4-201ENST00000233027 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
NEK4-201ENST00000233027 ZNF229Q9UJW7 825 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms