RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 GID8Q9NWU2 228 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 KLHL3Q9UH77 587 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 KLF15Q9UIH9 416 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 DNAJC16Q9Y2G8 782 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PCDHB4Q9Y5E5 795 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 SIPA1L3O60292 1781 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 SLIT2O94813 1529 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PASKQ96RG2 1323 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 A0A0U1RQJ8 604 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 FUOMA2VDF0 154 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 SFI1A8K8P3 1242 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 CENPBD1B2RD01 187 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 H0YGN5 161 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 AP3B1O00203 1094 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 HGSO14964 777 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 PABPC1P11940 636 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 ZNF18P17022 549 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 WEE1P30291 646 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PIK3CAP42336 1068 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 GRM2Q14416 872 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 ZNF174Q15697 407 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 NTRK3Q16288 839 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 BBS9Q3SYG4 887 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 C10orf62Q5T681 223 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 SPOPLQ6IQ16 392 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 FASTKD5Q7L8L6 764 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 ITIH5Q86UX2 942 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 ZNF654Q8IZM8 581 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 RIBC1Q8N443 379 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 HCAR2Q8TDS4 363 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PYROXD1Q8WU10 500 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 TMA16Q96EY4 203 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 OTUD5Q96G74 571 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 NUDCD1Q96RS6 583 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PDGFDQ9GZP0 370 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 RXFP1Q9HBX9 757 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 CCDC177Q9NQR7 707 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 THAP1Q9NVV9 213 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 MCM9Q9NXL9 1143 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 FAM198AQ9UFP1 575 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 TDRKHQ9Y2W6 561 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 NFS1Q9Y697 457 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 SCINQ9Y6U3 715 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 ZMYM6O95789 1325 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 FAM221BA6H8Z2 402 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 RIMBP2O15034 1052 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 POLR2DO15514 142 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 TRPA1O75762 1119 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 GLI3P10071 1580 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 IL32P24001 234 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PHBP35232 272 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 ETFBP38117 255 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 GSSP48637 474 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 EIF6P56537 245 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 RPS8P62241 208 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 KCNC4Q03721 635 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 AP1B1Q10567 949 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 LAPTM5Q13571 262 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 SF3B3Q15393 1217 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 CYTH1Q15438 398 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 TGFBIQ15582 683 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 PDXDC1Q6P996 788 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 SLC30A10Q6XR72 485 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 FAM196AQ6ZSG2 479 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 RFPL4BQ6ZWI9 263 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 JAMLQ86YT9 394 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 CNGA4Q8IV77 575 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 FOXP4Q8IVH2 680 aaPredicted RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 ARHGAP24Q8N264 748 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 CPSF7Q8N684 471 aaKnown RBP6.04□□□□□ -1.44
RFX4-201ENST00000229387 RDH13Q8NBN7 331 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 NPLOC4Q8TAT6 608 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 KCNG4Q8TDN1 519 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 NELFBQ8WX92 580 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 INPP5DQ92835 1189 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 GPKOWQ92917 476 aaPredicted RBP eCLIP6.04□□□□□ -1.44
RFX4-201ENST00000229387 CDHR1Q96JP9 859 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 NLRP3Q96P20 1036 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 HAUS8Q9BT25 410 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 LRMDAQ9H2I8 198 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 VAT1LQ9HCJ6 419 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
RFX4-201ENST00000229387 TTLL13PA6NNM8 815 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 H0YC42 278 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 CNOT3O75175 753 aaKnown RBP6.03□□□□□ -1.44
RFX4-201ENST00000229387 GJB6O95452 261 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 ABCB1P08183 1280 aaPredicted RBP6.03□□□□□ -1.44
RFX4-201ENST00000229387 FGRP09769 529 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 HOXB1P14653 301 aaPredicted RBP6.03□□□□□ -1.44
RFX4-201ENST00000229387 ZNF12P17014 697 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 PRCPP42785 496 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 BCAP31P51572 246 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 TPD52P55327 224 aaPredicted RBP6.03□□□□□ -1.44
RFX4-201ENST00000229387 MAP3K10Q02779 954 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 HLTFQ14527 1009 aaKnown RBP eCLIP6.03□□□□□ -1.44
RFX4-201ENST00000229387 ZC2HC1CQ53FD0 456 aaPredicted RBP6.03□□□□□ -1.44
RFX4-201ENST00000229387 BTBD8Q5XKL5 378 aa6.03□□□□□ -1.44
RFX4-201ENST00000229387 ZCCHC8Q6NZY4 707 aaKnown RBP6.03□□□□□ -1.44
RFX4-201ENST00000229387 SCG3Q8WXD2 468 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms