RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 ZNRF3Q9ULT6 936 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 PSMD14O00487 310 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 CAPZA2P47755 286 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 PPP2R2AP63151 447 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 FAM162AQ96A26 154 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 ZNF70Q9UC06 446 aaPredicted RBP11.67□□□□□ -0.54
KNOP1-201ENST00000219837 SCAF8Q9UPN6 1271 aaKnown RBP11.67□□□□□ -0.54
KNOP1-201ENST00000219837 FDX1P10109 184 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 MYCBPQ99417 103 aaPredicted RBP11.67□□□□□ -0.54
KNOP1-201ENST00000219837 SLC16A3O15427 465 aaKnown RBP11.67□□□□□ -0.54
KNOP1-201ENST00000219837 NFIXQ14938 502 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 EFCAB12Q6NXP0 572 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 TIPINQ9BVW5 301 aa11.67□□□□□ -0.54
KNOP1-201ENST00000219837 C3orf70A6NLC5 250 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 ANGPT2O15123 496 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 CD4P01730 458 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 DGKDQ16760 1214 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 TMED8Q6PL24 325 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 SENP7Q9BQF6 1050 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 C6orf203Q9P0P8 240 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 CEP152O94986 1710 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 GOLGA8RI6L899 631 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 IL10P22301 178 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 FCGRTP55899 365 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 HDAC4P56524 1084 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 HIF1AQ16665 826 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 TRIM48Q8IWZ4 208 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 UBA3Q8TBC4 463 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 APOL5Q9BWW9 433 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 FAM129AQ9BZQ8 928 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 YY1AP1Q9H869 796 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 C17orf102A2RUQ5 167 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 GSG1L2A8MUP6 293 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 SLC1A1P43005 524 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 P3H1Q32P28 736 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 ENO1P06733 434 aaKnown RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 HARS2P49590 506 aaKnown RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 TWF1Q12792 350 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 WDR72Q3MJ13 1102 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 ZRANB3Q5FWF4 1079 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 PTPRN2Q92932 1015 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 CATSPERBQ9H7T0 1116 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 SLC38A7Q9NVC3 462 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 PFASO15067 1338 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 IL18RAPO95256 599 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 SCP2P22307 547 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 TDRD10Q5VZ19 366 aaKnown RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 TSPAN17Q96FV3 270 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 FAM84BQ96KN1 310 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 OSBPL5Q9H0X9 879 aaPredicted RBP11.66□□□□□ -0.54
KNOP1-201ENST00000219837 NDE1Q9NXR1 346 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 FLT1P17948 1338 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
KNOP1-201ENST00000219837 GRAP2O75791 330 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 GRIN1Q05586 938 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 C10orf120Q5SQS8 335 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 PLA2G4FQ68DD2 849 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 ADNPQ9H2P0 1102 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 SPATS2LQ9NUQ6 558 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 AP3B1O00203 1094 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 MAFGO15525 162 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 RALBP11234 206 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 NCALDP61601 193 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 ATF7IP2Q5U623 682 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 SRBD1Q8N5C6 995 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 TMCO5AQ8N6Q1 288 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 C20orf96Q9NUD7 363 aaPredicted RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 CLTCQ00610 1675 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 CCL15-CCL14A0A0B4J2E2 113 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 PRR23AA6NEV1 266 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 C19orf81C9J6K1 198 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 VCAM1P19320 739 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 UBE3AQ05086 875 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 CCL15Q16663 113 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 PTRHD1Q6GMV3 140 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 HPS3Q969F9 1004 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 SH2D3AQ9BRG2 576 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 DDX47Q9H0S4 455 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 CPSF1Q10570 1443 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 ABCC3O15438 1527 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 H0Y626 953 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 STXBP3O00186 592 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 ARHGEF9O43307 516 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 SIRT2Q8IXJ6 389 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 DCP1BQ8IZD4 617 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 C18orf8Q96DM3 657 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 METTL5Q9NRN9 209 aaKnown RBP11.65□□□□□ -0.54
KNOP1-201ENST00000219837 GGA3Q9NZ52 723 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 CETPP11597 493 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 SOX11P35716 441 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 NCOA4Q13772 614 aa11.65□□□□□ -0.54
KNOP1-201ENST00000219837 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms