RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 MXD4Q14582 209 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 PLCB4Q15147 1175 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 EPC2Q52LR7 807 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 ARMC3Q5W041 872 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 C11orf96Q7Z7L8 435 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 SHCBP1Q8NEM2 672 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 TMC2Q8TDI7 906 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 BCAS4Q8TDM0 211 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 RIN2Q8WYP3 895 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 DHX38Q92620 1227 aaKnown RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 MS4A14Q96JA4 679 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 SELENOOQ9BVL4 669 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 MRPL4Q9BYD3 311 aaKnown RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 FAM169AQ9Y6X4 670 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 DNAJC25-GNG10A0A024R161 153 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 CEP104O60308 925 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 PECAM1P16284 738 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 EFNA5P52803 228 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 LAMC2Q13753 1193 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 CFAP221Q4G0U5 840 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 C1orf220Q5T0J3 134 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 DPY19L2P1Q6NXN4 242 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 GPR142Q7Z601 462 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 LNX1Q8TBB1 728 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 FGD4Q96M96 766 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 GDAP1L1Q96MZ0 367 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
MTHFD1-201ENST00000216605 IGKV6D-21A0A0A0MT36 114 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 GOLGA8KD6RF30 607 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 MAPK13O15264 365 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 STRNO43815 780 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 FTLP02792 175 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 APLP1P51693 650 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 TFAMQ00059 246 aaKnown RBP9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 SPRYD7Q5W111 196 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 SREK1Q8WXA9 508 aaKnown RBP9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 RNPEPQ9H4A4 650 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 NMRK2Q9NPI5 230 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 CHORDC1Q9UHD1 332 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 HLA-DRAP01903 254 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 KRT19P08727 400 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 INSRRP14616 1297 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 BDNFP23560 247 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 TMOD1P28289 359 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 LIG3P49916 1009 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 TRPC3Q13507 836 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 TAF1CQ15572 869 aaPredicted RBP9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 SPOPLQ6IQ16 392 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 B4GALNT4Q76KP1 1039 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 PLPPR4Q7Z2D5 763 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 PLEKHH3Q7Z736 793 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC47A2Q86VL8 602 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 LMO3Q8TAP4 145 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 PPP1R13LQ8WUF5 828 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 MS4A4AQ96JQ5 239 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 MFSD14AQ96MC6 490 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 RUFY1Q96T51 708 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 TLR10Q9BXR5 811 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 THAP2Q9H0W7 228 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 OSGEPQ9NPF4 335 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC5A4Q9NY91 659 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 TAS2R14Q9NYV8 317 aa9.52□□□□□ -0.89
MTHFD1-201ENST00000216605 A0A1B0GUA9 196 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 GRID2IPA4D2P6 1211 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 DCAF8L1A6NGE4 600 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 CALCAP01258 141 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 GCKP35557 465 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 OR6J1Q8NGC5 347 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 SLC35G2Q8TBE7 412 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 C17orf50Q8WW18 174 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 OTOFQ9HC10 1997 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PTPRFP10586 1907 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 MCM3APO60318 1980 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 AGPSO00116 658 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PDE2AO00408 941 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 DYNC1LI2O43237 492 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 LGALS2P05162 132 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 ANXA13P27216 316 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 FKBP1BP68106 108 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 CCDC15Q0P6D6 951 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 TARBP2Q15633 366 aaKnown RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PHLDB2Q86SQ0 1253 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 RUBCNQ92622 972 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PLEKHG4BQ96PX9 1271 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 SLX1AQ9BQ83 275 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 C2orf40Q9H1Z8 148 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 AMFRQ9UKV5 643 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 PCDHB4Q9Y5E5 795 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 WDR90Q96KV7 1748 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 EIF3HO15372 352 aaKnown RBP eCLIP9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 TOM1L1O75674 476 aa9.51□□□□□ -0.89
MTHFD1-201ENST00000216605 VTNP04004 478 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms