RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ACOX2Q99424 681 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 FAM192AQ9GZU8 254 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 LSG1Q9H089 658 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 S100A5P33763 92 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RPS7P62081 194 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 GCKRQ14397 625 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SUGP1Q8IWZ8 645 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 USB1Q9BQ65 265 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 MGAT4AQ9UM21 535 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PIK3R2O00459 728 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 NPHP4O75161 1426 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 SKAP2O75563 359 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 SLC11A2P49281 568 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RABGAP1LQ5R372 815 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 C10orf76Q5T2E6 689 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 NEK10Q6ZWH5 1172 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 EFL1Q7Z2Z2 1120 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 DDIASQ8IXT1 998 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SIX5Q8N196 739 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SLC7A14Q8TBB6 771 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CNBD2Q96M20 576 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PUS7LQ9H0K6 701 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 MIR1-1HGQ9H1L0 117 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 NGRNQ9NPE2 291 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 SCN3BQ9NY72 215 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 NESP48681 1621 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 C19orf81C9J6K1 198 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 DAB1O75553 588 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SERPINB3P29508 390 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MAPKAPK2P49137 400 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PMS1P54277 932 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 HUNKP57058 714 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CREMQ03060 361 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 HIBCHQ6NVY1 386 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 LRRC74BQ6ZQY2 392 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 POLKQ9UBT6 870 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ADAM30Q9UKF2 790 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RTN3O95197 1032 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 CCT5P48643 541 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ACSM2AQ08AH3 577 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ARL15Q9NXU5 204 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MAPK8IP1Q9UQF2 711 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TRPM2O94759 1503 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ZNF518AQ6AHZ1 1483 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TRIM64BA6NI03 449 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CASRP41180 1078 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 LRRC24Q50LG9 513 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 FAM45BPQ6NSW5 357 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SLAIN2Q9P270 581 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CYP7B1O75881 506 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CD4P01730 458 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ERCC1P07992 297 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 MBL2P11226 248 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 RBBP4Q09028 425 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ABRQ12979 859 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ALS2CLQ60I27 953 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CREB3L3Q68CJ9 461 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 FAM9CQ8IZT9 166 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 FSTL5Q8N475 847 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 ZWILCHQ9H900 591 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TPX2Q9ULW0 747 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 ZSCAN5CA6NGD5 496 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 RRN3P2A6NIE6 340 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 C3orf70A6NLC5 250 aaPredicted RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 MYO1GB0I1T2 1018 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RAD23AP54725 363 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PUS10Q3MIT2 529 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 TMEM199Q8N511 208 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 IL17RAQ96F46 866 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 WRNIP1Q96S55 665 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SLF1Q9BQI6 1058 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 COMMD9Q9P000 198 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 MRTO4Q9UKD2 239 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 DFFAO00273 331 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CLTBP09497 229 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TPI1P60174 286 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 STILQ15468 1287 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ZNF699Q32M78 642 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CENPUQ71F23 418 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RHPN2Q8IUC4 686 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 FAM45AQ8TCE6 357 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CRTAC1Q9NQ79 661 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TBC1D22BQ9NU19 505 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 TSR3Q9UJK0 312 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 PAIP2BQ9ULR5 123 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 KIF13AQ9H1H9 1805 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 AVPR1AP37288 418 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 RFX3P48380 749 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 SCARA5Q6ZMJ2 495 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PACS2Q86VP3 889 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 PNMA1Q8ND90 353 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 CRLS1Q9UJA2 301 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 DAGLAQ9Y4D2 1042 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 UBE4BO95155 1302 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 VWA5AO00534 786 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 KLHL18O94889 574 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 ASS1P00966 412 aaKnown RBP3.61□□□□□ -1.83
NEB-201ENST00000172853 ELK3P41970 407 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 EFNA5P52803 228 aa3.61□□□□□ -1.83
NEB-201ENST00000172853 DNM1Q05193 864 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms