RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 AFG3L2Q9Y4W6 797 aa14.02□□□□□ -0.16
CTNS-201ENST00000046640 PGK2P07205 417 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 SRGAP2CP0DJJ0 459 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 SCP2P22307 547 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 MAPK4P31152 587 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 RPL21P46778 160 aaKnown RBP14.02□□□□□ -0.17
CTNS-201ENST00000046640 SCTRP47872 440 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 ADCY1Q08828 1119 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 VGLL4Q14135 290 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 LRRC14Q15048 493 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 FAM133BQ5BKY9 247 aaKnown RBP14.02□□□□□ -0.17
CTNS-201ENST00000046640 WDR44Q5JSH3 913 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 AGBL2Q5U5Z8 902 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 WDR78Q5VTH9 848 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 DENND2CQ68D51 928 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 ACAD10Q6JQN1 1059 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 XRRA1Q6P2D8 792 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 MOB2Q70IA6 237 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 SLC17A8Q8NDX2 589 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 RDM1Q8NG50 284 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 OR5B17Q8NGF7 314 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 SLC7A3Q8WY07 619 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 HVCN1Q96D96 273 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 PRMT1Q99873 361 aaKnown RBP14.02□□□□□ -0.17
CTNS-201ENST00000046640 ELAC2Q9BQ52 826 aaKnown RBP14.02□□□□□ -0.17
CTNS-201ENST00000046640 MSTO1Q9BUK6 570 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 RAB17Q9H0T7 212 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 RBAKQ9NYW8 714 aaPredicted RBP14.02□□□□□ -0.17
CTNS-201ENST00000046640 USTQ9Y2C2 406 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
CTNS-201ENST00000046640 OATP04181 439 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 VPS41P49754 854 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 OSTNP61366 133 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 SNRPFP62306 86 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 DUPD1Q68J44 220 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 YTHDF3Q7Z739 585 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 USP37Q86T82 979 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 XPO6Q96QU8 1125 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 C11orf70Q9BRQ4 267 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 APOBEC3GQ9HC16 384 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 GINM1Q9NU53 330 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 ATP8B3O60423 1300 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 MIF4GDA9UHW6 222 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 KIAA0391O15091 583 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 RGS16O15492 202 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 EXTL3O43909 919 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 TNFSF9P41273 254 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CYB5D1Q6P9G0 228 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CRELD2Q6UXH1 353 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 APOBEC3FQ8IUX4 373 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 TMEM130Q8N3G9 435 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CDHR1Q96JP9 859 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CXorf56Q9H5V9 222 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 GTF3C4Q9UKN8 822 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 PCDHB4Q9Y5E5 795 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 DKC1O60832 514 aaKnown RBP eCLIP14.01□□□□□ -0.174e-15■■■■■ 36.5
CTNS-201ENST00000046640 PHF2O75151 1096 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 USP2O75604 605 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 RASSF9O75901 435 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 VNN1O95497 513 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CYP1A2P05177 515 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 GJB1P08034 283 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CHRM1P11229 460 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 DRD4P21917 467 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 GSCP56915 257 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 PPP1R7Q15435 360 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 CLEC16AQ2KHT3 1053 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 SLC13A5Q86YT5 568 aaPredicted RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 LRRC71Q8N4P6 559 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 PSPC1Q8WXF1 523 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 CHMP6Q96FZ7 201 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 C17orf75Q9HAS0 396 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 KLHL11Q9NVR0 708 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 GPRC5DQ9NZD1 345 aa14.01□□□□□ -0.17
CTNS-201ENST00000046640 DIS3Q9Y2L1 958 aaKnown RBP14.01□□□□□ -0.17
CTNS-201ENST00000046640 CENPFP49454 3210 aa14□□□□□ -0.17
CTNS-201ENST00000046640 ADM5C9JUS6 153 aa14□□□□□ -0.17
CTNS-201ENST00000046640 DDNO94850 711 aaPredicted RBP14□□□□□ -0.17
CTNS-201ENST00000046640 CD58P19256 250 aa14□□□□□ -0.17
CTNS-201ENST00000046640 GARTP22102 1010 aa14□□□□□ -0.17
CTNS-201ENST00000046640 PTGIRP43119 386 aa14□□□□□ -0.17
CTNS-201ENST00000046640 OAZ1P54368 228 aa14□□□□□ -0.17
CTNS-201ENST00000046640 TMEM63BQ5T3F8 832 aa14□□□□□ -0.17
CTNS-201ENST00000046640 PARP9Q8IXQ6 854 aa14□□□□□ -0.17
CTNS-201ENST00000046640 LRRC34Q8IZ02 419 aa14□□□□□ -0.17
CTNS-201ENST00000046640 KIRREL3Q8IZU9 778 aa14□□□□□ -0.17
CTNS-201ENST00000046640 TMEM174Q8WUU8 243 aa14□□□□□ -0.17
CTNS-201ENST00000046640 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14□□□□□ -0.17
CTNS-201ENST00000046640 CD101Q93033 1021 aa14□□□□□ -0.17
CTNS-201ENST00000046640 OTUD5Q96G74 571 aa14□□□□□ -0.17
CTNS-201ENST00000046640 HERPUD2Q9BSE4 406 aa14□□□□□ -0.17
CTNS-201ENST00000046640 WNT8AQ9H1J5 351 aa14□□□□□ -0.17
CTNS-201ENST00000046640 ZDHHC18Q9NUE0 388 aa14□□□□□ -0.17
CTNS-201ENST00000046640 BAIAP2L1Q9UHR4 511 aa14□□□□□ -0.17
CTNS-201ENST00000046640 LOXHD1Q8IVV2 1947 aa14□□□□□ -0.17
CTNS-201ENST00000046640 RWDD2BP57060 319 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms