RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Wars2Q9CYK1 360 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rrp15Q9CYX7 281 aaKnown RBP13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Trim42Q9D2H5 723 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ccdc130Q9D516 385 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Scnn1bQ9WU38 638 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lactbl1S4R213 581 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rbp3P49194 1234 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Rgs9bpQ148R9 237 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Znf746Q3U133 652 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Prmt9Q3U3W5 846 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Scnn1aQ61180 699 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Dlg4Q62108 724 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ces1eQ64176 562 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 NrcamQ810U4 1256 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Lrit1Q8K099 624 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ppp1r3gQ9CW07 347 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Zbtb12Q9Z150 459 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Myh3P13541 1940 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Timm44O35857 452 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Per2O54943 1257 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 ArP19091 899 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Fmr1P35922 614 aaKnown RBP13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ugt1a2P70691 533 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Ppfia2Q8BSS9 1257 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Tmem145Q8C4U2 746 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Pkn3Q8K045 878 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Cdk5rap3Q99LM2 503 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 Mphosph6Q9D1Q1 161 aa13.46□□□□□ -0.25
Clcn3-201ENSMUST00000004430 B020011L13RikA0A087WQI7 412 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Slc3a2P10852 526 aaKnown RBP13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tnnc2P20801 160 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gpr101Q80T62 511 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Neto2Q8BNJ6 525 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ttc39bQ8BYY4 617 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Afg3l2Q8JZQ2 802 aaKnown RBP13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Onecut3Q8K557 490 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Kndc1Q0KK55 1742 aa13.46□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Mast2Q60592 1734 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gbp6A0A0G2JDV3 611 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Mroh7A2AVR2 1279 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 AoahO35298 574 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sash1P59808 1230 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Abi2P62484 446 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sema5aQ62217 1077 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Anapc5Q8BTZ4 740 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gprasp2Q8BUY8 826 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sugp1Q8CH02 643 aaKnown RBP13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 YwhabQ9CQV8 246 aaKnown RBP13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Nt5c3aQ9D020 331 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Atp6v1g2Q9WTT4 118 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ggt5Q9Z2A9 573 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Bnip3lQ9Z2F7 218 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Prdm11A2AGX3 565 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Pdcd2P46718 343 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ppp4cP97470 307 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Klhdc10Q6PAR0 439 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ppp1r11Q8K1L5 131 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Nudt5Q9JKX6 218 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Slc22a3Q9WTW5 551 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Zfyve9A2A8R0 1397 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 1700122O11RikJ3QPW6 241 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 EsrraO08580 422 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tmc8Q7TN58 722 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Q80ZQ3 298 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Slc4a7Q8BTY2 1034 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Cabcoco1Q8CDT7 208 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Mill1Q8HWE7 395 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Catsper1Q91ZR5 686 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Zfyve19Q9DAZ9 389 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Usp29Q9ES63 869 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ccdc22Q9JIG7 627 aa13.45□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Arhgap33Q80YF9 1305 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm5737A0A140LI11 423 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Fgf15O35622 218 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Mphosph8Q3TYA6 858 aaKnown RBP13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Mysm1Q69Z66 819 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Lrig3Q6P1C6 1117 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Rapgef5Q8C0Q9 814 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Nemp2Q8CB65 421 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Cyp2d26Q8CIM7 500 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 OafQ8QZR4 282 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Tll2Q9WVM6 1012 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm3424L7N298 263 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gm8246M0QWX9 263 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Oprl1P35377 367 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Psmc1P62192 440 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 HdxQ14B70 692 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ccdc127Q3TC33 260 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ptk6Q64434 451 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Atxn2lQ7TQH0 1049 aaKnown RBP13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Trmt2aQ8BNV1 574 aaKnown RBP13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Osbpl2Q8BX94 484 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Gtpbp10Q8K013 366 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Anapc4Q91W96 807 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Ces1fQ91WU0 561 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 4921530L21RikQ9CQ47 274 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Sh2d3cQ9QZS8 854 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Phf2Q9WTU0 1096 aa13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Marf1Q8BJ34 1730 aaKnown RBP13.44□□□□□ -0.26
Clcn3-201ENSMUST00000004430 Magea10A2AMW4 325 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms