RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SQORQ9Y6N5 450 aa16.57■□□□□ 0.24
CLN6-219ENST00000637329 ANK1P16157 1881 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 EIF3CLB5ME19 914 aaKnown RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 IPO7O95373 1038 aaKnown RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 HLA-DRAP01903 254 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 TNNC2P02585 160 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 CXCL8P10145 99 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 FGFR4P22455 802 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 MFAP3P55082 362 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 BIRC3Q13489 604 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 DUOXA2Q1HG44 320 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 SEZ6Q53EL9 994 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 TDRD12Q587J7 1177 aaKnown RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 WDR44Q5JSH3 913 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 HGSNATQ68CP4 663 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 PHLDB3Q6NSJ2 640 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 TOGARAM2Q6ZUX3 1019 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 FAM228AQ86W67 206 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 ZNF516Q92618 1163 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 JAKMIP2Q96AA8 810 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 ZNF333Q96JL9 665 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 ACAP3Q96P50 834 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 EIF3CQ99613 913 aaKnown RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 CHP1Q99653 195 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 IMPG2Q9BZV3 1241 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 NHEJ1Q9H9Q4 299 aaPredicted RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 PLEKHA5Q9HAU0 1116 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 CHST12Q9NRB3 414 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 ARHGAP20Q9P2F6 1191 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 C2CD2Q9Y426 696 aa16.56■□□□□ 0.24
CLN6-219ENST00000637329 TRIP12Q14669 1992 aaPredicted RBP16.56■□□□□ 0.24
CLN6-219ENST00000637329 RPS6KA5O75582 802 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 NPTXRO95502 500 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 CCL5P13501 91 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 CLCN1P35523 988 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 SOX5P35711 763 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 KRT83P78385 493 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 MTF1Q14872 753 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 TRIM71Q2Q1W2 868 aaKnown RBP16.55■□□□□ 0.24
CLN6-219ENST00000637329 USP38Q8NB14 1042 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 SEMA4DQ92854 862 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 WNT8BQ93098 351 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 PPP1R13BQ96KQ4 1090 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 CCDC42Q96M95 316 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
CLN6-219ENST00000637329 MTMR12Q9C0I1 747 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 AJAP1Q9UKB5 411 aaPredicted RBP16.55■□□□□ 0.24
CLN6-219ENST00000637329 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
CLN6-219ENST00000637329 EPN1Q9Y6I3 576 aaPredicted RBP16.55■□□□□ 0.24
CLN6-219ENST00000637329 ATP8B3O60423 1300 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 ARVCFO00192 962 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 GPR182O15218 404 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 PHACTR2O75167 634 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 GFPT2O94808 682 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 LCA5LO95447 670 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 VNN1O95497 513 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 TBXAS1P24557 533 aaPredicted RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 YARSP54577 528 aaKnown RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 KLHL30Q0D2K2 578 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 NCOA4Q13772 614 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 DRAP1Q14919 205 aaPredicted RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 LMBRD2Q68DH5 695 aaPredicted RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 GJB7Q6PEY0 223 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 FAM43BQ6ZT52 329 aaPredicted RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 EFCAB13Q8IY85 973 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 C17orf53Q8N3J3 647 aaPredicted RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 PPM1KQ8N3J5 372 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 TXLNBQ8N3L3 684 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 OR5B17Q8NGF7 314 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 HELQQ8TDG4 1101 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 SHC3Q92529 594 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 TAF4BQ92750 862 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 FAXDC2Q96IV6 333 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 SNX27Q96L92 541 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 GPR88Q9GZN0 384 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
CLN6-219ENST00000637329 UBE2TQ9NPD8 197 aaPredicted RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 NOC2LQ9Y3T9 749 aaKnown RBP16.54■□□□□ 0.24
CLN6-219ENST00000637329 CEP290O15078 2479 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 LACTBL1A8MY62 500 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 RBAK-RBAKDNI3L0D1 243 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 KIF2AO00139 706 aaPredicted RBP16.53■□□□□ 0.24
CLN6-219ENST00000637329 CHRNA1P02708 482 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 TUBB4AP04350 444 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 CTSHP09668 335 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 THPOP40225 353 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 KIF11P52732 1056 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 OSTNP61366 133 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 SLC10A6Q3KNW5 377 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 FBXO47Q5MNV8 452 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 ZNF662Q6ZS27 426 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 TRAPPC11Q7Z392 1133 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 IRF2BP2Q7Z5L9 587 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 VPS36Q86VN1 386 aa16.53■□□□□ 0.24
CLN6-219ENST00000637329 TMEM192Q8IY95 271 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms