RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 PPP2R3AQ06190 1150 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 SPAG1Q07617 926 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 HSP90AA2PQ14568 343 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 NFKBIBQ15653 356 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 UPP1Q16831 310 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TCEAL5Q5H9L2 206 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ARMCX5Q6P1M9 558 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 DCLRE1AQ6PJP8 1040 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 CD300LGQ6UXG3 332 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 RNF168Q8IYW5 571 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 VPS52Q8N1B4 723 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 MRPL43Q8N983 215 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ERCC4Q92889 916 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 C18orf25Q96B23 403 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 SAAL1Q96ER3 474 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 DDX27Q96GQ7 796 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 UROC1Q96N76 676 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TCF25Q9BQ70 676 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 FAM213AQ9BRX8 229 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 KCTD10Q9H3F6 313 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 PCIF1Q9H4Z3 704 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ASB7Q9H672 318 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GOLGA2P5Q9HBQ8 144 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 NGRNQ9NPE2 291 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 CGNQ9P2M7 1197 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 STK39Q9UEW8 545 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 HOOK1Q9UJC3 728 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 COL6A3P12111 3177 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ANK1P16157 1881 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GOLGA8IPA6NC78 632 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GOLGA8JA6NMD2 632 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TMEM189-UBE2V1I3L0A0 370 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TADA2AO75478 443 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 CSPG5O95196 566 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 KIF4AO95239 1232 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 SMC2O95347 1197 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 CTSAP10619 480 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 CYP3A5P20815 502 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 WNT7BP56706 349 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 JADE1Q6IE81 842 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 HS2ST1Q7LGA3 356 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TAS1R1Q7RTX1 841 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TMC7Q7Z402 723 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ADGRD2Q7Z7M1 963 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 C12orf56Q8IXR9 622 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GPD1LQ8N335 351 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 TMEM174Q8WUU8 243 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 KIF12Q96FN5 646 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GBP4Q96PP9 640 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GPR62Q9BZJ7 368 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ZBP1Q9H171 429 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 ENTPD7Q9NQZ7 604 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 LMBRD1Q9NUN5 540 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 RMND1Q9NWS8 449 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 HSPBP1Q9NZL4 362 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 DERAQ9Y315 318 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.58□□□□□ -0.72
LINC00339-210ENST00000635675 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
LINC00339-210ENST00000635675 REV3LO60673 3130 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 C2orf71A6NGG8 1288 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 HIDE1A8MVS5 230 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 PDXKO00764 312 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 CLIC2O15247 247 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 LILRB3O75022 631 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 B3GAT3O94766 335 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 KIF20AO95235 890 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 IL18RAPO95256 599 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 CXCL14O95715 111 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 SOD2P04179 222 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 NFICP08651 508 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 LRPAP1P30533 357 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 HYAL1Q12794 435 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 SMC1AQ14683 1233 aaKnown RBP10.57□□□□□ -0.72
LINC00339-210ENST00000635675 ZNF658Q5TYW1 1059 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-210ENST00000635675 KIAA0319Q5VV43 1072 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 SPATA1Q5VX52 437 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 PLPP4Q5VZY2 271 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 CBWD2Q8IUF1 395 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 BRSK2Q8IWQ3 736 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 GUF1Q8N442 669 aaKnown RBP10.57□□□□□ -0.72
LINC00339-210ENST00000635675 XXYLT1Q8NBI6 393 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 C3orf58Q8NDZ4 430 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 GOLGA5Q8TBA6 731 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 SMARCE1Q969G3 411 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 FAM212AQ96EL1 285 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 HERC2P3Q9BVR0 1158 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 KIAA1586Q9HCI6 787 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 CHST7Q9NS84 486 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 DMAC2Q9NW81 257 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 RBAKQ9NYW8 714 aaPredicted RBP10.57□□□□□ -0.72
LINC00339-210ENST00000635675 TUBGCP4Q9UGJ1 667 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 UBQLN1Q9UMX0 589 aaKnown RBP10.57□□□□□ -0.72
LINC00339-210ENST00000635675 MAPK8IP1Q9UQF2 711 aa10.57□□□□□ -0.72
LINC00339-210ENST00000635675 C2CD2Q9Y426 696 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms