RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
LINC00339-207ENST00000634712 TTC28Q96AY4 2481 aa17.12■□□□□ 0.33
LINC00339-207ENST00000634712 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 A0A0B4J269 797 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 TRAPPC3O43617 180 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 LILRB3O75022 631 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 CXCL8P10145 99 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 ASIC1P78348 528 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 CREMQ03060 361 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 PPP2R3AQ06190 1150 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 ALCAMQ13740 583 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 POSTNQ15063 836 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 SLC10A6Q3KNW5 377 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 ADALQ6DHV7 355 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 CES5AQ6NT32 575 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 ELMSAN1Q6PJG2 1045 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 RNF168Q8IYW5 571 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-207ENST00000634712 CEP57L1Q8IYX8 460 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 LEO1Q8WVC0 666 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-207ENST00000634712 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 B3GALT6Q96L58 329 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 POP1Q99575 1024 aaKnown RBP17.11■□□□□ 0.33
LINC00339-207ENST00000634712 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 HAPLN2Q9GZV7 340 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-207ENST00000634712 GOLGA2P5Q9HBQ8 144 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 DZANK1Q9NVP4 752 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 DPP7Q9UHL4 492 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
LINC00339-207ENST00000634712 USP15Q9Y4E8 981 aaPredicted RBP17.11■□□□□ 0.33
LINC00339-207ENST00000634712 CITO14578 2027 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 EFEMP2O95967 443 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 EPCAMP16422 314 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 RPL9P32969 192 aaKnown RBP17.1■□□□□ 0.33
LINC00339-207ENST00000634712 NUCB2P80303 420 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 UPP1Q16831 310 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 L1TD1Q5T7N2 865 aaKnown RBP17.1■□□□□ 0.33
LINC00339-207ENST00000634712 ADHFE1Q8IWW8 467 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 GPR65Q8IYL9 337 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 GJD3Q8N144 294 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 SLC22A17Q8WUG5 538 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 POMGNT1Q8WZA1 660 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 KIF12Q96FN5 646 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 ZMAT2Q96NC0 199 aaKnown RBP17.1■□□□□ 0.33
LINC00339-207ENST00000634712 TRIM9Q9C026 710 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 RXFP1Q9HBX9 757 aa17.1■□□□□ 0.33
LINC00339-207ENST00000634712 AGO2Q9UKV8 859 aaKnown RBP17.1■□□□□ 0.33
LINC00339-207ENST00000634712 NCOR1O75376 2440 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.09■□□□□ 0.33
LINC00339-207ENST00000634712 TMEM189-UBE2V1I3L0A0 370 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
LINC00339-207ENST00000634712 PODXLO00592 558 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 TEX28O15482 410 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 XPOTO43592 962 aaKnown RBP17.09■□□□□ 0.33
LINC00339-207ENST00000634712 MYBP10242 640 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 CMA1P23946 247 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 TNFSF9P41273 254 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 CLCN4P51793 760 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 ITIH3Q06033 890 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 SLC39A4Q6P5W5 647 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 SYCE2Q6PIF2 218 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 CD302Q8IX05 232 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 C18orf25Q96B23 403 aaPredicted RBP17.09■□□□□ 0.33
LINC00339-207ENST00000634712 FBXL18Q96ME1 805 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 C7orf25Q9BPX7 421 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 TMEM206Q9H813 350 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 FNIP2Q9P278 1114 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 NUB1Q9Y5A7 615 aa17.09■□□□□ 0.33
LINC00339-207ENST00000634712 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.09■□□□□ 0.33
LINC00339-207ENST00000634712 TTC26A0AVF1 554 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 LACTBL1A8MY62 500 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 PPP1R37O75864 691 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 GLUD1P00367 558 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 AFMP43652 599 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 SOX4Q06945 474 aaPredicted RBP17.08■□□□□ 0.32
LINC00339-207ENST00000634712 SPAG1Q07617 926 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 RARS2Q5T160 578 aaKnown RBP17.08■□□□□ 0.32
LINC00339-207ENST00000634712 GLYCTKQ8IVS8 523 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 TSPAN18Q96SJ8 248 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 STRA6Q9BX79 667 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 S1PR5Q9H228 398 aa17.08■□□□□ 0.32
LINC00339-207ENST00000634712 A0A1B0GVL5 298 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 TISP43B9A030 160 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 PRPF6O94906 941 aaKnown RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 ACOT2P49753 483 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 ZP2Q05996 745 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 KCNA1Q09470 495 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 PSMD5Q16401 504 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 RTP2Q5QGT7 225 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 ZBTB41Q5SVQ8 909 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
LINC00339-207ENST00000634712 C12orf76Q8N812 135 aaPredicted RBP17.07■□□□□ 0.32
LINC00339-207ENST00000634712 CHAMP1Q96JM3 812 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms