RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 GSTCDQ8NEC7 633 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 SP7Q8TDD2 431 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-219ENST00000629151 CCDC127Q96BQ5 260 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 ANKRD36BP1Q96IX9 119 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
PTPN7-219ENST00000629151 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 PDE11AQ9HCR9 933 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 RNF19AQ9NV58 838 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 INTS13Q9NVM9 706 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 FANCLQ9NW38 375 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 KLK14Q9P0G3 267 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 MSRAQ9UJ68 235 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPN7-219ENST00000629151 MYH11P35749 1972 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 ALPK3Q96L96 1907 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 LRRC10BA6NIK2 292 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 DLATP10515 647 aaKnown RBP12.49□□□□□ -0.41
PTPN7-219ENST00000629151 LAG3P18627 525 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 PNPLA4P41247 253 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 ALDH7A1P49419 539 aaKnown RBP12.49□□□□□ -0.41
PTPN7-219ENST00000629151 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
PTPN7-219ENST00000629151 DSC1Q08554 894 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 IQCB1Q15051 598 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 CDKAL1Q5VV42 579 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 JADE1Q6IE81 842 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 TRIM59Q8IWR1 403 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 CNOT6LQ96LI5 555 aaKnown RBP12.49□□□□□ -0.41
PTPN7-219ENST00000629151 ZFP42Q96MM3 310 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 SAMD11Q96NU1 681 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
PTPN7-219ENST00000629151 CBX8Q9HC52 389 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 BRCA2P51587 3418 aa12.49□□□□□ -0.41
PTPN7-219ENST00000629151 ARHGEF37A1IGU5 675 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 KCNJ18B7U540 433 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 PTGESO14684 152 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 POMCP01189 267 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 ZNF18P17022 549 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 LRPAP1P30533 357 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 PPM1AP35813 382 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 MTIF2P46199 727 aaKnown RBP12.48□□□□□ -0.41
PTPN7-219ENST00000629151 SCNN1GP51170 649 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 RBP5P82980 135 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 TFAMQ00059 246 aaKnown RBP12.48□□□□□ -0.41
PTPN7-219ENST00000629151 KCNJ12Q14500 433 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 NCAPHQ15003 741 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 MAN2A1Q16706 1144 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 LRIT3Q3SXY7 679 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 TCP11X2Q5H9J9 407 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 TCERG1LQ5VWI1 586 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 KRT39Q6A163 491 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 DCLRE1AQ6PJP8 1040 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 CREBRFQ8IUR6 639 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 DHX40Q8IX18 779 aaKnown RBP12.48□□□□□ -0.41
PTPN7-219ENST00000629151 ZSWIM2Q8NEG5 633 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM8AQ9HCN3 771 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 SAMSN1Q9NSI8 373 aaKnown RBP12.48□□□□□ -0.41
PTPN7-219ENST00000629151 MIOSQ9NXC5 875 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 DPP3Q9NY33 737 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 PCDHB12Q9Y5F1 795 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 SIP14410 1827 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 LTBP2Q14767 1821 aa12.48□□□□□ -0.41
PTPN7-219ENST00000629151 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM189-UBE2V1I3L0A0 370 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
PTPN7-219ENST00000629151 TRAPPC3O43617 180 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 PHACTR2O75167 634 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 RB1P06400 928 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 ATICP31939 592 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 TRPC3Q13507 836 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 ZACNQ401N2 412 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 FILIP1LQ4L180 1135 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 SPOUT1Q5T280 376 aaKnown RBP12.47□□□□□ -0.41
PTPN7-219ENST00000629151 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 LRRC52Q8N7C0 313 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 CCDC150Q8NCX0 1101 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 TAF4BQ92750 862 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
PTPN7-219ENST00000629151 SLC35C1Q96A29 364 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
PTPN7-219ENST00000629151 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 TUBGCP2Q9BSJ2 902 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 PLVAPQ9BX97 442 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 LIMA1Q9UHB6 759 aaKnown RBP12.47□□□□□ -0.41
PTPN7-219ENST00000629151 FAN1Q9Y2M0 1017 aa12.47□□□□□ -0.41
PTPN7-219ENST00000629151 GTPBP10A4D1E9 387 aaKnown RBP12.46□□□□□ -0.41
PTPN7-219ENST00000629151 MEFVO15553 781 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms