RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 MLF2Q15773 248 aaPredicted RBP12.18□□□□□ -0.46
DDX41-218ENST00000625286 MAPK6Q16659 721 aa12.18□□□□□ -0.46
DDX41-218ENST00000625286 LIN9Q5TKA1 542 aa12.18□□□□□ -0.46
DDX41-218ENST00000625286 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
DDX41-218ENST00000625286 ZNF687Q8N1G0 1237 aa12.18□□□□□ -0.46
DDX41-218ENST00000625286 TMEM130Q8N3G9 435 aa12.18□□□□□ -0.46
DDX41-218ENST00000625286 C4orf32Q8N8J7 132 aa12.18□□□□□ -0.46
DDX41-218ENST00000625286 MCPH1Q8NEM0 835 aa12.18□□□□□ -0.46
DDX41-218ENST00000625286 DDX27Q96GQ7 796 aaKnown RBP12.18□□□□□ -0.46
DDX41-218ENST00000625286 ZMAT2Q96NC0 199 aaKnown RBP12.18□□□□□ -0.46
DDX41-218ENST00000625286 SMIM28A0A1B0GU29 152 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 TMEM189-UBE2V1I3L0A0 370 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 TBC1D4O60343 1298 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 B3GAT3O94766 335 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 SEC24AO95486 1093 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 FCARP24071 287 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 TARSP26639 723 aaKnown RBP12.17□□□□□ -0.46
DDX41-218ENST00000625286 CCR2P41597 374 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 RBM25P49756 843 aaKnown RBP12.17□□□□□ -0.46
DDX41-218ENST00000625286 ANAPC15P60006 121 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 UVSSAQ2YD98 709 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 PABPC1LQ4VXU2 614 aaKnown RBP12.17□□□□□ -0.46
DDX41-218ENST00000625286 XKR4Q5GH76 650 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 TANGO2Q6ICL3 276 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 TAS1R3Q7RTX0 852 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 ZBTB8OSQ8IWT0 167 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 NELL1Q92832 810 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 TCEAL4Q96EI5 215 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 MCRS1Q96EZ8 462 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 CCDC43Q96MW1 224 aaKnown RBP12.17□□□□□ -0.46
DDX41-218ENST00000625286 BRMS1Q9HCU9 246 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 PTPRHQ9HD43 1115 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 LTB4R2Q9NPC1 389 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 DLL3Q9NYJ7 618 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 BACE2Q9Y5Z0 518 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 EPG5Q9HCE0 2579 aa12.17□□□□□ -0.46
DDX41-218ENST00000625286 ABLIM1O14639 778 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 XYLBO75191 536 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 ABLIM3O94929 683 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 RHOP08100 348 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 CEBPBP17676 345 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 PRKCQQ04759 706 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 CSTF1Q05048 431 aaKnown RBP12.16□□□□□ -0.46
DDX41-218ENST00000625286 ELAVL2Q12926 359 aaKnown RBP12.16□□□□□ -0.46
DDX41-218ENST00000625286 NBR1Q14596 966 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 UBXN2BQ14CS0 331 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 ZNF528Q3MIS6 628 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 PRSS36Q5K4E3 855 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 ATF7IP2Q5U623 682 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 MTSS1LQ765P7 747 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 DAW1Q8N136 415 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 RUBCNQ92622 972 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 SHDQ96IW2 340 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 OSBPL6Q9BZF3 934 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 SPATA6Q9NWH7 488 aaPredicted RBP12.16□□□□□ -0.46
DDX41-218ENST00000625286 KCNH3Q9ULD8 1083 aa12.16□□□□□ -0.46
DDX41-218ENST00000625286 ARHGEF37A1IGU5 675 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 WDR27A2RRH5 827 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 ARHGEF35A5YM69 484 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 MOSPD3O75425 235 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 ECI2O75521 394 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 SEC24BO95487 1268 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 TGM1P22735 817 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 ROR1Q01973 937 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 MRPL58Q14197 206 aaKnown RBP12.15□□□□□ -0.46
DDX41-218ENST00000625286 SLC8B1Q6J4K2 584 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 PDXDC1Q6P996 788 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 DGLUCYQ7Z3D6 616 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 ZBTB44Q8NCP5 570 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 ZNF461Q8TAF7 563 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 C18orf25Q96B23 403 aaPredicted RBP12.15□□□□□ -0.46
DDX41-218ENST00000625286 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
DDX41-218ENST00000625286 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 CDT1Q9H211 546 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 BHMT2Q9H2M3 363 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 AVENQ9NQS1 362 aaPredicted RBP12.15□□□□□ -0.46
DDX41-218ENST00000625286 HEBP1Q9NRV9 189 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 FBXO4Q9UKT5 387 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 TNFSF13BQ9Y275 285 aa12.15□□□□□ -0.46
DDX41-218ENST00000625286 MRPS23Q9Y3D9 190 aaKnown RBP12.15□□□□□ -0.46
DDX41-218ENST00000625286 COL4A2P08572 1712 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 NCANO14594 1321 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 LILRB5O75023 590 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 OR52Z1P0C646 297 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 TDGF1P13385 188 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 TOB1P50616 345 aaPredicted RBP12.14□□□□□ -0.47
DDX41-218ENST00000625286 NEK4P51957 841 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 OSTNP61366 133 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 IL17AQ16552 155 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 RSPO4Q2I0M5 234 aaPredicted RBP12.14□□□□□ -0.47
DDX41-218ENST00000625286 DCAF4L1Q3SXM0 396 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 FAM78AQ5JUQ0 283 aa12.14□□□□□ -0.47
DDX41-218ENST00000625286 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms