RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ADPGKQ9BRR6 497 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 UPF3AQ9H1J1 476 aaKnown RBP23.11■■□□□ 1.29
SPAST-204ENST00000621856 MRFAP1Q9Y605 127 aa23.11■■□□□ 1.29
SPAST-204ENST00000621856 CYP26A1O43174 497 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 GPR32O75388 356 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 CLTAP09496 248 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 TMEM191BP0C7N4 346 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 STAG3L1P0CL83 205 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 CXCL8P10145 99 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 ELNP15502 786 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 TFAMQ00059 246 aaKnown RBP23.1■■□□□ 1.29
SPAST-204ENST00000621856 SPOPLQ6IQ16 392 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 SLC30A5Q8TAD4 765 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 SYT11Q9BT88 431 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 IMPG2Q9BZV3 1241 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 MTMR12Q9C0I1 747 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 NENFQ9UMX5 172 aa23.1■■□□□ 1.29
SPAST-204ENST00000621856 SGPL1O95470 568 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 TNNC2P02585 160 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 H2AFZP0C0S5 128 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 KRT5P13647 590 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 HOXD10P28358 340 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 NCBP1Q09161 790 aaKnown RBP23.09■■□□□ 1.29
SPAST-204ENST00000621856 KYAT1Q16773 422 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 H2AFVQ71UI9 128 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 CATSPER4Q7RTX7 472 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 TMEM192Q8IY95 271 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 CD99L2Q8TCZ2 262 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 SLC20A1Q8WUM9 679 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 DHX38Q92620 1227 aaKnown RBP23.09■■□□□ 1.29
SPAST-204ENST00000621856 ANKRD36BP1Q96IX9 119 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 NOX5Q96PH1 765 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 OSMRQ99650 979 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 CAPN6Q9Y6Q1 641 aa23.09■■□□□ 1.29
SPAST-204ENST00000621856 BUB1O43683 1085 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 PRKAR2AP13861 404 aaKnown RBP23.08■■□□□ 1.29
SPAST-204ENST00000621856 TRAPPC11Q7Z392 1133 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 RPUSD2Q8IZ73 545 aaKnown RBP23.08■■□□□ 1.29
SPAST-204ENST00000621856 RNF10Q8N5U6 811 aaKnown RBP23.08■■□□□ 1.29
SPAST-204ENST00000621856 OLIG1Q8TAK6 271 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 CFHR5Q9BXR6 569 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 CDHR5Q9HBB8 845 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 SALL4Q9UJQ4 1053 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 ATP8B3O60423 1300 aa23.08■■□□□ 1.29
SPAST-204ENST00000621856 B4GALT4O60513 344 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 CCND3P30281 292 aaPredicted RBP23.08■■□□□ 1.28
SPAST-204ENST00000621856 NOP14P78316 857 aaKnown RBP23.08■■□□□ 1.28
SPAST-204ENST00000621856 TUBB2AQ13885 445 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 CXCL17Q6UXB2 119 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 APBB1IPQ7Z5R6 666 aaPredicted RBP23.08■■□□□ 1.28
SPAST-204ENST00000621856 EFCAB13Q8IY85 973 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 MNS1Q8NEH6 495 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 ERO1AQ96HE7 468 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 TUBB2BQ9BVA1 445 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 XPNPEP3Q9NQH7 507 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 SRRDQ9UH36 339 aa23.08■■□□□ 1.28
SPAST-204ENST00000621856 A0A1B0GUA9 196 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 TMCO5BA8MYB1 307 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 DYNC1I1O14576 645 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 ENC1O14682 589 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 CTIFO43310 598 aaKnown RBP23.07■■□□□ 1.28
SPAST-204ENST00000621856 DARSP14868 501 aaKnown RBP23.07■■□□□ 1.28
SPAST-204ENST00000621856 PDE6CP51160 858 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 TRPC3Q13507 836 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 DNAAF5Q86Y56 855 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 EPS8L1Q8TE68 723 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 ARID3AQ99856 593 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 CARD6Q9BX69 1037 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 APOBEC3GQ9HC16 384 aaKnown RBP23.07■■□□□ 1.28
SPAST-204ENST00000621856 CDC23Q9UJX2 597 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 INTUQ9ULD6 942 aa23.07■■□□□ 1.28
SPAST-204ENST00000621856 MYCNP04198 464 aaPredicted RBP23.06■■□□□ 1.28
SPAST-204ENST00000621856 ATP1A1P05023 1023 aaKnown RBP23.06■■□□□ 1.28
SPAST-204ENST00000621856 TBXAS1P24557 533 aaPredicted RBP23.06■■□□□ 1.28
SPAST-204ENST00000621856 MAP2K2P36507 400 aa23.06■■□□□ 1.28
SPAST-204ENST00000621856 CUL2Q13617 745 aa23.06■■□□□ 1.28
SPAST-204ENST00000621856 DCAF4L1Q3SXM0 396 aa23.06■■□□□ 1.28
SPAST-204ENST00000621856 TAF3Q5VWG9 929 aa23.06■■□□□ 1.28
SPAST-204ENST00000621856 NOP9Q86U38 636 aaKnown RBP23.06■■□□□ 1.28
SPAST-204ENST00000621856 SLC47A2Q86VL8 602 aa23.06■■□□□ 1.28
SPAST-204ENST00000621856 MYH10P35580 1976 aa23.06■■□□□ 1.28
SPAST-204ENST00000621856 ANO9A1A5B4 782 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 BTNL10A8MVZ5 291 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 LACTBL1A8MY62 500 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 CST3P01034 146 aaPredicted RBP23.05■■□□□ 1.28
SPAST-204ENST00000621856 HOXC8P31273 242 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 POU5F1Q01860 360 aaKnown RBP23.05■■□□□ 1.28
SPAST-204ENST00000621856 NOCTQ9UK39 431 aaKnown RBP23.05■■□□□ 1.28
SPAST-204ENST00000621856 NUB1Q9Y5A7 615 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 SCN10AQ9Y5Y9 1956 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 NPTXRO95502 500 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 CYP11B1P15538 503 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 PCBP1Q15365 356 aaKnown RBP eCLIP23.05■■□□□ 1.28
SPAST-204ENST00000621856 NBPF20Q3BBV1 942 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 NME8Q8N427 588 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 TSC1Q92574 1164 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 ACAP3Q96P50 834 aa23.05■■□□□ 1.28
SPAST-204ENST00000621856 ADAMTS4O75173 837 aa23.04■■□□□ 1.28
SPAST-204ENST00000621856 ASS1P00966 412 aaKnown RBP23.04■■□□□ 1.28
SPAST-204ENST00000621856 HMGCRP04035 888 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms