RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MTCH2Q9Y6C9 303 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 UNC80Q8N2C7 3258 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 SCN1AP35498 2009 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 PDXKO00764 312 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 EXTL3O43909 919 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 LDHAP00338 332 aaKnown RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 MCM4P33991 863 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 PPM1AP35813 382 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 OR1G1P47890 313 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 PPP2R3AQ06190 1150 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 CBWD2Q8IUF1 395 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 BRSK2Q8IWQ3 736 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 EFCAB13Q8IY85 973 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 RNF168Q8IYW5 571 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 C3orf58Q8NDZ4 430 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 POF1BQ8WVV4 589 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 DMAC2Q9NW81 257 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 SPG21Q9NZD8 308 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 TUBGCP4Q9UGJ1 667 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 FAN1Q9Y2M0 1017 aa15.57■□□□□ 0.08
CBWD3-217ENST00000621474 PRG3Q9Y2Y8 225 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-217ENST00000621474 BRWD1Q9NSI6 2320 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 GOLGA6L22H0YM25 854 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 BIN1O00499 593 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 KIAA0391O15091 583 aaKnown RBP15.56■□□□□ 0.08
CBWD3-217ENST00000621474 ALDH2P05091 517 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 NFICP08651 508 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 IRS1P35568 1242 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 CLCNKBP51801 687 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 UPP1Q16831 310 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 CD300LGQ6UXG3 332 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 HS2ST1Q7LGA3 356 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 ADSSL1Q8N142 457 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 GZF1Q9H116 711 aaPredicted RBP15.56■□□□□ 0.08
CBWD3-217ENST00000621474 CGNQ9P2M7 1197 aaKnown RBP15.56■□□□□ 0.08
CBWD3-217ENST00000621474 VCANP13611 3396 aa15.56■□□□□ 0.08
CBWD3-217ENST00000621474 KIF4AO95239 1232 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 FOSL2P15408 326 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 CYP2J2P51589 502 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 PMS1P54277 932 aaKnown RBP15.55■□□□□ 0.08
CBWD3-217ENST00000621474 ERVFC1P60507 584 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 SLC9A9Q8IVB4 645 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 MRPL38Q96DV4 380 aaKnown RBP15.55■□□□□ 0.08
CBWD3-217ENST00000621474 KIF12Q96FN5 646 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 FAM84AQ96KN4 292 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 GAS2L1Q99501 681 aaPredicted RBP15.55■□□□□ 0.08
CBWD3-217ENST00000621474 ASB7Q9H672 318 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 RBAKQ9NYW8 714 aaPredicted RBP15.55■□□□□ 0.08
CBWD3-217ENST00000621474 LZTS1Q9Y250 596 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 PCDHGC5Q9Y5F6 944 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 PTPRJQ12913 1337 aa15.55■□□□□ 0.08
CBWD3-217ENST00000621474 CSPG5O95196 566 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 IGFBP4P22692 258 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 GUCY2FP51841 1108 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 UBE3AQ05086 875 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 HSP90AA2PQ14568 343 aaPredicted RBP15.54■□□□□ 0.08
CBWD3-217ENST00000621474 SNRNP35Q16560 246 aaKnown RBP15.54■□□□□ 0.08
CBWD3-217ENST00000621474 NFIL3Q16649 462 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 CENPPQ6IPU0 288 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 CD302Q8IX05 232 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 XXYLT1Q8NBI6 393 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 HASPINQ8TF76 798 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 TMEM169Q96HH4 297 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 NUP62CLQ9H1M0 184 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 PDE11AQ9HCR9 933 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 SLC38A7Q9NVC3 462 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 LMCD1Q9NZU5 365 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 C2CD2Q9Y426 696 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 CARNS1A5YM72 827 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 PPP1R3GB7ZBB8 358 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 FSCN2O14926 492 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 KIF20AO95235 890 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 NR3C1P04150 777 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 CASP4P49662 377 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 SPATA1Q5VX52 437 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 SCARA3Q6AZY7 606 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 DDX53Q86TM3 631 aaKnown RBP15.54■□□□□ 0.08
CBWD3-217ENST00000621474 RDH13Q8NBN7 331 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 GOLGA5Q8TBA6 731 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 PLEKHO2Q8TD55 490 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 GPR62Q9BZJ7 368 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 LMAN2LQ9H0V9 348 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 ZBP1Q9H171 429 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 TLR9Q9NR96 1032 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 ADAM28Q9UKQ2 775 aa15.54■□□□□ 0.08
CBWD3-217ENST00000621474 TRIM49BA6NDI0 452 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 ZNF233A6NK53 670 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 TMEM189-UBE2V1I3L0A0 370 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 IL18RAPO95256 599 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 CYP3A5P20815 502 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 LRPAP1P30533 357 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 FUT10Q6P4F1 479 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 RBM43Q6ZSC3 357 aaKnown RBP15.53■□□□□ 0.08
CBWD3-217ENST00000621474 TAS1R1Q7RTX1 841 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 TRIML1Q8N9V2 468 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 CXorf38Q8TB03 319 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 NOC3LQ8WTT2 800 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms