RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 GTF2F1P35269 517 aaKnown RBP eCLIP11.75□□□□□ -0.537e-26■■■□□ 18.2
TARDBP-223ENST00000620632 CLCNKBP51801 687 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 GUCY2FP51841 1108 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 UBE3AQ05086 875 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 ZBTB6Q15916 424 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
TARDBP-223ENST00000620632 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 SCARA3Q6AZY7 606 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 ARMCX5Q6P1M9 558 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 STXBP4Q6ZWJ1 553 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 TAS1R1Q7RTX1 841 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 DDX53Q86TM3 631 aaKnown RBP11.75□□□□□ -0.53
TARDBP-223ENST00000620632 EFCAB13Q8IY85 973 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
TARDBP-223ENST00000620632 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 TMEM169Q96HH4 297 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 GPR62Q9BZJ7 368 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 ZBP1Q9H171 429 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 RPF1Q9H9Y2 349 aaKnown RBP11.75□□□□□ -0.53
TARDBP-223ENST00000620632 PRDM6Q9NQX0 595 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 TLR9Q9NR96 1032 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 HSPBP1Q9NZL4 362 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 LZTS1Q9Y250 596 aa11.75□□□□□ -0.53
TARDBP-223ENST00000620632 HIDE1A8MVS5 230 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 KINO60870 393 aaKnown RBP11.74□□□□□ -0.53
TARDBP-223ENST00000620632 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
TARDBP-223ENST00000620632 PTPROQ16827 1216 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 UPP1Q16831 310 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 PLPP4Q5VZY2 271 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 CBWD2Q8IUF1 395 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 VPS52Q8N1B4 723 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 B3GALT6Q96L58 329 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 NSUN3Q9H649 340 aaKnown RBP11.74□□□□□ -0.53
TARDBP-223ENST00000620632 PLEKHA5Q9HAU0 1116 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 MAN1B1Q9UKM7 699 aa11.74□□□□□ -0.53
TARDBP-223ENST00000620632 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 PPEF2O14830 753 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 EXTL3O43909 919 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 CTSAP10619 480 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 BMP6P22004 513 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 CYP2J2P51589 502 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 RBM10P98175 930 aaKnown RBP11.73□□□□□ -0.53
TARDBP-223ENST00000620632 KRT17Q04695 432 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 HYAL1Q12794 435 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 PTPRJQ12913 1337 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 CAMK4Q16566 473 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 KYAT1Q16773 422 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 TIGD5Q53EQ6 642 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 ISM2Q6H9L7 571 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 FUT10Q6P4F1 479 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 C12orf56Q8IXR9 622 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 GPD1LQ8N335 351 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 GPT2Q8TD30 523 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 NOC3LQ8WTT2 800 aaKnown RBP11.73□□□□□ -0.53
TARDBP-223ENST00000620632 SMARCE1Q969G3 411 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 GSDMAQ96QA5 445 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 ADAM28Q9UKQ2 775 aa11.73□□□□□ -0.53
TARDBP-223ENST00000620632 MTCL1Q9Y4B5 1905 aaKnown RBP11.73□□□□□ -0.53
TARDBP-223ENST00000620632 C2orf71A6NGG8 1288 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 TMEM189-UBE2V1I3L0A0 370 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 I3L4J1 428 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 PODXLO00592 558 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 PER2O15055 1255 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 LINC01565O15544 149 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 LILRB3O75022 631 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 SOD2P04179 222 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 PRCPP42785 496 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 BRCC3P46736 316 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 ZCWPW2Q504Y3 356 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 ZNF658Q5TYW1 1059 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 SPATA1Q5VX52 437 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 GUF1Q8N442 669 aaKnown RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 RDH13Q8NBN7 331 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 VN1R2Q8NFZ6 395 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 CCDC34Q96HJ3 373 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 GBP4Q96PP9 640 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 COLEC11Q9BWP8 271 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 GZF1Q9H116 711 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 ASB7Q9H672 318 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 PDE11AQ9HCR9 933 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 SLC38A7Q9NVC3 462 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 DMAC2Q9NW81 257 aa11.72□□□□□ -0.53
TARDBP-223ENST00000620632 RBAKQ9NYW8 714 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
TARDBP-223ENST00000620632 CARNS1A5YM72 827 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms