RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 POU5F1Q01860 360 aaKnown RBP11.02□□□□□ -0.65
VPS11-207ENST00000620429 CYP4A11Q02928 519 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 LRRC14Q15048 493 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 RPS6KA1Q15418 735 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 PRR5LQ6MZQ0 368 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 RFWD3Q6PCD5 774 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 DSTYKQ6XUX3 929 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 FAM47EQ6ZV65 393 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 SATL1Q86VE3 508 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 VPS50Q96JG6 964 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 TGS1Q96RS0 853 aaKnown RBP11.02□□□□□ -0.65
VPS11-207ENST00000620429 ECSITQ9BQ95 431 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 TANGO6Q9C0B7 1094 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 USP29Q9HBJ7 922 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 EURLQ9NYK6 297 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 AMACRQ9UHK6 382 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.02□□□□□ -0.65
VPS11-207ENST00000620429 TDRKHQ9Y2W6 561 aaKnown RBP11.02□□□□□ -0.65
VPS11-207ENST00000620429 GOLGB1Q14789 3259 aaKnown RBP11.02□□□□□ -0.65
VPS11-207ENST00000620429 FLT1P17948 1338 aa11.02□□□□□ -0.65
VPS11-207ENST00000620429 TMEM120BA0PK00 339 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 TTI1O43156 1089 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 ZBTB48P10074 688 aaPredicted RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 AMPD3Q01432 767 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 NSUN2Q08J23 767 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS11-207ENST00000620429 SLC29A2Q14542 456 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 CENPPQ6IPU0 288 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 VSTM1Q6UX27 236 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 BAP1Q92560 729 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 ROPN1BQ9BZX4 212 aaPredicted RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 ROPN1Q9HAT0 212 aaPredicted RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 SAR1AQ9NR31 198 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 ZNHIT2Q9UHR6 403 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 ANGPTL2Q9UKU9 493 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 PACSIN2Q9UNF0 486 aaPredicted RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 STARD13Q9Y3M8 1113 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 HBS1LQ9Y450 684 aaKnown RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 SH3PXD2BA1X283 911 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 FBP2O00757 339 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 HGSO14964 777 aaPredicted RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 COL6A2P12110 1019 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 VPS41P49754 854 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 GRAPQ13588 217 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 DEPDC1Q5TB30 811 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 C1orf228Q6PIY5 440 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 HEATR3Q7Z4Q2 680 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 RASGEF1CQ8N431 466 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 GRAPLQ8TC17 118 aaPredicted RBP11.01□□□□□ -0.65
VPS11-207ENST00000620429 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 NACC2Q96BF6 587 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 HSPBAP1Q96EW2 488 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 SH3GL1Q99961 368 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 SH3GLB2Q9NR46 395 aa11.01□□□□□ -0.65
VPS11-207ENST00000620429 SMIM23A6NLE4 172 aa11□□□□□ -0.65
VPS11-207ENST00000620429 LAD1O00515 517 aa11□□□□□ -0.65
VPS11-207ENST00000620429 KRIT1O00522 736 aa11□□□□□ -0.65
VPS11-207ENST00000620429 RASGRF2O14827 1237 aa11□□□□□ -0.65
VPS11-207ENST00000620429 AP1G1O43747 822 aa11□□□□□ -0.65
VPS11-207ENST00000620429 OR6B1O95007 311 aa11□□□□□ -0.65
VPS11-207ENST00000620429 APLP1P51693 650 aa11□□□□□ -0.65
VPS11-207ENST00000620429 CDR2Q01850 454 aa11□□□□□ -0.65
VPS11-207ENST00000620429 KLRC3Q07444 240 aa11□□□□□ -0.65
VPS11-207ENST00000620429 PIP4K2CQ8TBX8 421 aa11□□□□□ -0.65
VPS11-207ENST00000620429 ANKS1AQ92625 1134 aa11□□□□□ -0.65
VPS11-207ENST00000620429 STMN2Q93045 179 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DYNLL2Q96FJ2 89 aa11□□□□□ -0.65
VPS11-207ENST00000620429 PRICKLE1Q96MT3 831 aaPredicted RBP11□□□□□ -0.65
VPS11-207ENST00000620429 AP1M1Q9BXS5 423 aa11□□□□□ -0.65
VPS11-207ENST00000620429 CADM1Q9BY67 442 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 CRNKL1Q9BZJ0 848 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 MRPL46Q9H2W6 279 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 EMILIN3Q9NT22 766 aa11□□□□□ -0.65
VPS11-207ENST00000620429 ZDHHC7Q9NXF8 308 aa11□□□□□ -0.65
VPS11-207ENST00000620429 MCM9Q9NXL9 1143 aa11□□□□□ -0.65
VPS11-207ENST00000620429 TSC22D4Q9Y3Q8 395 aa11□□□□□ -0.65
VPS11-207ENST00000620429 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
VPS11-207ENST00000620429 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
VPS11-207ENST00000620429 BTNL10A8MVZ5 291 aa11□□□□□ -0.65
VPS11-207ENST00000620429 A8MXQ7 604 aa11□□□□□ -0.65
VPS11-207ENST00000620429 M0R2N6 131 aa11□□□□□ -0.65
VPS11-207ENST00000620429 TPPPO94811 219 aa11□□□□□ -0.65
VPS11-207ENST00000620429 FGFR1OPO95684 399 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 OR52Z1P0C646 297 aa11□□□□□ -0.65
VPS11-207ENST00000620429 KLRC1P26715 233 aa11□□□□□ -0.65
VPS11-207ENST00000620429 PFKPQ01813 784 aa11□□□□□ -0.65
VPS11-207ENST00000620429 LETM2Q2VYF4 491 aa11□□□□□ -0.65
VPS11-207ENST00000620429 SLC9C1Q4G0N8 1177 aa11□□□□□ -0.65
VPS11-207ENST00000620429 ZNF394Q53GI3 561 aa11□□□□□ -0.65
VPS11-207ENST00000620429 SOGA3Q5TF21 947 aa11□□□□□ -0.65
VPS11-207ENST00000620429 IZUMO2Q6UXV1 221 aa11□□□□□ -0.65
VPS11-207ENST00000620429 ARHGAP27Q6ZUM4 889 aa11□□□□□ -0.65
VPS11-207ENST00000620429 CXorf38Q8TB03 319 aa11□□□□□ -0.65
VPS11-207ENST00000620429 EPS8L3Q8TE67 593 aaKnown RBP11□□□□□ -0.65
VPS11-207ENST00000620429 SH3RF3Q8TEJ3 882 aaPredicted RBP11□□□□□ -0.65
VPS11-207ENST00000620429 AK8Q96MA6 479 aa11□□□□□ -0.65
VPS11-207ENST00000620429 MIPEPQ99797 713 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms