RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 STX1AQ16623 288 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 BMT2Q1RMZ1 405 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CTC1Q2NKJ3 1217 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 DCAF4L1Q3SXM0 396 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 LEXMQ3ZCV2 418 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 SCARA3Q6AZY7 606 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 MPZL3Q6UWV2 235 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CRELD2Q6UXH1 353 aaPredicted RBP5.72□□□□□ -1.49
SHMT1-211ENST00000618902 ZPBP2Q6X784 338 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF280BQ86YH2 543 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CCDC65Q8IXS2 484 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 SMYD4Q8IYR2 804 aaPredicted RBP5.72□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF507Q8TCN5 953 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 HELQQ8TDG4 1101 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 HDAC7Q8WUI4 952 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 BCL7CQ8WUZ0 217 aaPredicted RBP5.72□□□□□ -1.49
SHMT1-211ENST00000618902 ZNF558Q96NG5 402 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 GAD1Q99259 594 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CBWD1Q9BRT8 395 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 C17orf80Q9BSJ5 609 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 APOL6Q9BWW8 343 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 TRIM6Q9C030 488 aaPredicted RBP5.72□□□□□ -1.49
SHMT1-211ENST00000618902 TRIM5Q9C035 493 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CWH43Q9H720 699 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 MRPL44Q9H9J2 332 aaKnown RBP5.72□□□□□ -1.49
SHMT1-211ENST00000618902 CERS4Q9HA82 394 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 SLC39A2Q9NP94 309 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 TLR9Q9NR96 1032 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 SPG21Q9NZD8 308 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 KLK14Q9P0G3 267 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 MAN1B1Q9UKM7 699 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 GDAQ9Y2T3 454 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 PCDHA5Q9Y5H7 936 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 STYXL1Q9Y6J8 313 aa5.72□□□□□ -1.49
SHMT1-211ENST00000618902 WDFY4Q6ZS81 3184 aa5.71□□□□□ -1.49
SHMT1-211ENST00000618902 A0A0B4J269 797 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ARL5CA6NH57 179 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 CTIFO43310 598 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TOM1L1O75674 476 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 RECQL4O94761 1208 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 DDHD2O94830 711 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 RHOBTB3O94955 611 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 GCNT3O95395 438 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ADRB2P07550 413 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 HARSP12081 509 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 CD44P16070 742 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TNFSF9P41273 254 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 SCNN1GP51170 649 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 OSTNP61366 133 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 AMPD3Q01432 767 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 RNASELQ05823 741 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 SOX4Q06945 474 aaPredicted RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ELAVL2Q12926 359 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ALCAMQ13740 583 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 KCNB1Q14721 858 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ENOX2Q16206 610 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 CAMK4Q16566 473 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 SLC10A6Q3KNW5 377 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ZNF568Q3ZCX4 644 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 XKR4Q5GH76 650 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 NOMO2Q5JPE7 1267 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 SPOUT1Q5T280 376 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ISM2Q6H9L7 571 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 KCNT2Q6UVM3 1135 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ALKAL1Q6UXT8 129 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 DDX53Q86TM3 631 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM173Q86WV6 379 aaPredicted RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 NELFCDQ8IXH7 590 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 DRC7Q8IY82 874 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 THNSL1Q8IYQ7 743 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 EFHBQ8N7U6 833 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 SPPL3Q8TCT6 385 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 HVCN1Q96D96 273 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TMEM169Q96HH4 297 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 UROC1Q96N76 676 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ZMAT2Q96NC0 199 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ACCSQ96QU6 501 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 PAAF1Q9BRP4 392 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 CCDC94Q9BW85 323 aaPredicted RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 VN1R3Q9BXE9 311 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 OXCT2Q9BYC2 517 aaPredicted RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 KCTD10Q9H3F6 313 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 NRDE2Q9H7Z3 1164 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 RSAD1Q9HA92 442 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TOPORSQ9NS56 1045 aaPredicted RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TYW1Q9NV66 732 aaKnown RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 EXOC1Q9NV70 894 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 TBC1D13Q9NVG8 400 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ANKFY1Q9P2R3 1169 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 MTUS1Q9ULD2 1270 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 MAPK8IP1Q9UQF2 711 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 INPP5FQ9Y2H2 1132 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 ARIH1Q9Y4X5 557 aaPredicted RBP5.71□□□□□ -1.5
SHMT1-211ENST00000618902 KIAA1671Q9BY89 1806 aa5.71□□□□□ -1.5
SHMT1-211ENST00000618902 CITO14578 2027 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 CACNA1HO95180 2353 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 ARHGEF37A1IGU5 675 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 GOLGA8IPA6NC78 632 aa5.7□□□□□ -1.5
SHMT1-211ENST00000618902 GOLGA8JA6NMD2 632 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms