RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 TLL1O43897 1013 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
MALAT1-213ENST00000618227 DSC1Q08554 894 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 TMEM132DQ14C87 1099 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 NAB2Q15742 525 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 DUOXA2Q1HG44 320 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 TRIM59Q8IWR1 403 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 DHX40Q8IX18 779 aaKnown RBP17.12■□□□□ 0.33
MALAT1-213ENST00000618227 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 DDX27Q96GQ7 796 aaKnown RBP17.12■□□□□ 0.33
MALAT1-213ENST00000618227 UROC1Q96N76 676 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 ZMAT2Q96NC0 199 aaKnown RBP17.12■□□□□ 0.33
MALAT1-213ENST00000618227 CGRRF1Q99675 332 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 TMEM175Q9BSA9 504 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 CBX8Q9HC52 389 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 PDE11AQ9HCR9 933 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 TBC1D13Q9NVG8 400 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 INTS13Q9NVM9 706 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 MIOSQ9NXC5 875 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 KLK14Q9P0G3 267 aa17.12■□□□□ 0.33
MALAT1-213ENST00000618227 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
MALAT1-213ENST00000618227 LRRC10BA6NIK2 292 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 ZNF18P17022 549 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 SCNN1GP51170 649 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 TPM4P67936 248 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 SMAD3P84022 425 aaKnown RBP17.11■□□□□ 0.33
MALAT1-213ENST00000618227 TUSC3Q13454 348 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
MALAT1-213ENST00000618227 RAB30Q15771 203 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 AOPEPQ8N6M6 819 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 BEST2Q8NFU1 509 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
MALAT1-213ENST00000618227 FAM212AQ96EL1 285 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 FANCLQ9NW38 375 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 INPP5FQ9Y2H2 1132 aa17.11■□□□□ 0.33
MALAT1-213ENST00000618227 CEP290O15078 2479 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 LRRIQ3A6PVS8 624 aaPredicted RBP17.1■□□□□ 0.33
MALAT1-213ENST00000618227 RBAK-RBAKDNI3L0D1 243 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 LRPAP1P30533 357 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 AFF1P51825 1210 aaKnown RBP17.1■□□□□ 0.33
MALAT1-213ENST00000618227 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
MALAT1-213ENST00000618227 LRIT3Q3SXY7 679 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 TCP11X2Q5H9J9 407 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 COLGALT2Q8IYK4 626 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 ANKRD20A12PQ8NF67 263 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 PLEKHO2Q8TD55 490 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 SLC35C1Q96A29 364 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 CCDC127Q96BQ5 260 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 EEF2KMTQ96G04 330 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 ANKRD36BP1Q96IX9 119 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
MALAT1-213ENST00000618227 FAM193BQ96PV7 902 aaPredicted RBP17.1■□□□□ 0.33
MALAT1-213ENST00000618227 SAMSN1Q9NSI8 373 aaKnown RBP17.1■□□□□ 0.33
MALAT1-213ENST00000618227 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
MALAT1-213ENST00000618227 P4HA2O15460 535 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 POMCP01189 267 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 TNNC2P02585 160 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 NFICP08651 508 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 TNNI1P19237 187 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
MALAT1-213ENST00000618227 WNT7BP56706 349 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 C1orf220Q5T0J3 134 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 C15orf39Q6ZRI6 1047 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 EFCAB13Q8IY85 973 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 HSD3B7Q9H2F3 369 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 CWH43Q9H720 699 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 TMEM8AQ9HCN3 771 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
MALAT1-213ENST00000618227 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.09■□□□□ 0.33
MALAT1-213ENST00000618227 TNRC18O15417 2968 aaPredicted RBP17.08■□□□□ 0.33
MALAT1-213ENST00000618227 ANO9A1A5B4 782 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 KCNJ18B7U540 433 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 TMEM189-UBE2V1I3L0A0 370 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 N4BP1O75113 896 aaKnown RBP17.08■□□□□ 0.32
MALAT1-213ENST00000618227 DDHD2O94830 711 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 C4BPAP04003 597 aaKnown RBP17.08■□□□□ 0.32
MALAT1-213ENST00000618227 ALDH2P05091 517 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 TMEM191BP0C7N4 346 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.32
MALAT1-213ENST00000618227 LAG3P18627 525 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 GATMP50440 423 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 TFAMQ00059 246 aaKnown RBP17.08■□□□□ 0.32
MALAT1-213ENST00000618227 KCNJ12Q14500 433 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 MAN2A1Q16706 1144 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 ZACNQ401N2 412 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 FAM117BQ6P1L5 589 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 DCLRE1AQ6PJP8 1040 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
MALAT1-213ENST00000618227 PLVAPQ9BX97 442 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 CXCL16Q9H2A7 254 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 NRDE2Q9H7Z3 1164 aa17.08■□□□□ 0.32
MALAT1-213ENST00000618227 DPP3Q9NY33 737 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms