RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 DUOXA2Q1HG44 320 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 RRAGAQ7L523 313 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 SMG8Q8ND04 991 aaKnown RBP25.32■■□□□ 1.64
CCND3-223ENST00000616010 SNX27Q96L92 541 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 EDEM3Q9BZQ6 932 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 TMX1Q9H3N1 280 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 C11orf49Q9H6J7 331 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 AJAP1Q9UKB5 411 aaPredicted RBP25.32■■□□□ 1.64
CCND3-223ENST00000616010 TRIP11Q15643 1979 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 LRRC53A6NM62 1247 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 DCDC2CA8MYV0 355 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 TLE2Q04725 743 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 C1orf53Q5VUE5 145 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 OR8K1Q8NGG5 319 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 ANKRD36BP1Q96IX9 119 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 FAM105AQ9NUU6 356 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 PCDHB2Q9Y5E7 798 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 TANC1Q9C0D5 1861 aa25.32■■□□□ 1.64
CCND3-223ENST00000616010 PITPNM1O00562 1244 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 MGEA5O60502 916 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 PHACTR2O75167 634 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 VNN1O95497 513 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 HLA-DRAP01903 254 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 IQCEQ6IPM2 695 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 PHLDB3Q6NSJ2 640 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 CCDC112Q8NEF3 446 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 BAG1Q99933 345 aaPredicted RBP25.31■■□□□ 1.64
CCND3-223ENST00000616010 IFIH1Q9BYX4 1025 aaKnown RBP25.31■■□□□ 1.64
CCND3-223ENST00000616010 FBXL5Q9UKA1 691 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 ATP11BQ9Y2G3 1177 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 UMODL1Q5DID0 1318 aa25.31■■□□□ 1.64
CCND3-223ENST00000616010 MKI67P46013 3256 aaKnown RBP25.31■■□□□ 1.64
CCND3-223ENST00000616010 NRDCO43847 1150 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 TNNC2P02585 160 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 SKILP12757 684 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 FAAP100Q0VG06 881 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 RAPGEF1Q13905 1077 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 TRAPPC11Q7Z392 1133 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 TMEM139Q8IV31 216 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 ELMO3Q96BJ8 720 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 TOX2Q96NM4 488 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 PI4K2AQ9BTU6 479 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 RNF39Q9H2S5 420 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 PARP2Q9UGN5 583 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 TMEM132DQ14C87 1099 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 PDXDC1Q6P996 788 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 ARHGEF19Q8IW93 802 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 CXCL16Q9H2A7 254 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 PLEKHA5Q9HAU0 1116 aa25.3■■□□□ 1.64
CCND3-223ENST00000616010 TSR1Q2NL82 804 aaKnown RBP25.29■■□□□ 1.64
CCND3-223ENST00000616010 GPIHBP1Q8IV16 184 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 CD302Q8IX05 232 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 SPAG5Q96R06 1193 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 NAA15Q9BXJ9 866 aaKnown RBP25.29■■□□□ 1.64
CCND3-223ENST00000616010 HIPK3Q9H422 1215 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 DNAJC12Q9UKB3 198 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 ZKSCAN5Q9Y2L8 839 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 PDCD11Q14690 1871 aaKnown RBP25.29■■□□□ 1.64
CCND3-223ENST00000616010 NCOA4Q13772 614 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 DSC3Q14574 896 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 E4F1Q66K89 784 aaPredicted RBP25.29■■□□□ 1.64
CCND3-223ENST00000616010 KIF12Q96FN5 646 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 NT5C1BQ96P26 610 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 ADAM2Q99965 735 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 KLK14Q9P0G3 267 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 C2CD2Q9Y426 696 aa25.29■■□□□ 1.64
CCND3-223ENST00000616010 CLSTN1O94985 981 aa25.28■■□□□ 1.64
CCND3-223ENST00000616010 RFX1P22670 979 aa25.28■■□□□ 1.64
CCND3-223ENST00000616010 SCARA3Q6AZY7 606 aa25.28■■□□□ 1.64
CCND3-223ENST00000616010 PPP1R12CQ9BZL4 782 aa25.28■■□□□ 1.64
CCND3-223ENST00000616010 CNTN3Q9P232 1028 aa25.28■■□□□ 1.64
CCND3-223ENST00000616010 GLRA4Q5JXX5 417 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 TMEM130Q8N3G9 435 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 PPM1KQ8N3J5 372 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 UBE2TQ9NPD8 197 aaPredicted RBP25.27■■□□□ 1.64
CCND3-223ENST00000616010 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.27■■□□□ 1.64
CCND3-223ENST00000616010 PYCARDQ9ULZ3 195 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 NBNO60934 754 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 LRRC26Q2I0M4 334 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 WDR59Q6PJI9 974 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 ALKAL1Q6UXT8 129 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 NECAB2Q7Z6G3 386 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 NT5DC4Q86YG4 428 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 HACE1Q8IYU2 909 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 C1orf127Q8N9H9 656 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 ZMAT2Q96NC0 199 aaKnown RBP25.27■■□□□ 1.64
CCND3-223ENST00000616010 NUCKS1Q9H1E3 243 aaKnown RBP25.27■■□□□ 1.64
CCND3-223ENST00000616010 C1orf112Q9NSG2 853 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 ZNHIT6Q9NWK9 470 aaKnown RBP25.27■■□□□ 1.64
CCND3-223ENST00000616010 PLAGL2Q9UPG8 496 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 DAAM1Q9Y4D1 1078 aa25.27■■□□□ 1.64
CCND3-223ENST00000616010 ZC3H11AO75152 810 aaKnown RBP eCLIP25.26■■□□□ 1.634e-6■■□□□ 14.4
CCND3-223ENST00000616010 CST3P01034 146 aaPredicted RBP25.26■■□□□ 1.63
CCND3-223ENST00000616010 IBSPP21815 317 aaPredicted RBP25.26■■□□□ 1.63
CCND3-223ENST00000616010 FECHP22830 423 aa25.26■■□□□ 1.63
CCND3-223ENST00000616010 RAB27AP51159 221 aa25.26■■□□□ 1.63
CCND3-223ENST00000616010 JAM2P57087 298 aa25.26■■□□□ 1.63
CCND3-223ENST00000616010 TRPC3Q13507 836 aa25.26■■□□□ 1.63
CCND3-223ENST00000616010 WDR44Q5JSH3 913 aa25.26■■□□□ 1.63
CCND3-223ENST00000616010 SPOPLQ6IQ16 392 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms