RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 DIAPH2O60879 1101 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 HSPA9P38646 679 aaKnown RBP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 IREB2P48200 963 aaKnown RBP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 SLC8A3P57103 927 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 SPIRE2Q8WWL2 714 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 SEMA4DQ92854 862 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 IFT74Q96LB3 600 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 TAF1DQ9H5J8 278 aaPredicted RBP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 PGK2P07205 417 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 UBA1P22314 1058 aaKnown RBP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 EMC2Q15006 297 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 KRT71Q3SY84 523 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 TAS1R3Q7RTX0 852 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 RIOX2Q8IUF8 465 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 TPCN2Q8NHX9 752 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 AGAP11Q8TF27 550 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 FAM213AQ9BRX8 229 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 FAM167BQ9BTA0 163 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
CNOT3-208ENST00000613073 C15orf41Q9Y2V0 281 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 BTNL10A8MVZ5 291 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 SNX1Q13596 522 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 RPS6KA1Q15418 735 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 C9orf131Q5VYM1 1079 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 CAPRIN2Q6IMN6 1127 aaKnown RBP17.64■□□□□ 0.41
CNOT3-208ENST00000613073 TMEM174Q8WUU8 243 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 AP1M1Q9BXS5 423 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 IGSF9BQ9UPX0 1349 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 DNAJC8O75937 253 aaPredicted RBP17.64■□□□□ 0.41
CNOT3-208ENST00000613073 DRD4P21917 467 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 ANXA13P27216 316 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 SNRPFP62306 86 aaKnown RBP17.64■□□□□ 0.41
CNOT3-208ENST00000613073 LACTB2Q53H82 288 aaPredicted RBP17.64■□□□□ 0.41
CNOT3-208ENST00000613073 THEMIS2Q5TEJ8 643 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 DAAM2Q86T65 1068 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 MAB21L3Q8N8X9 362 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 LRRC57Q8N9N7 239 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 PRCCQ92733 491 aaPredicted RBP17.64■□□□□ 0.41
CNOT3-208ENST00000613073 SYT11Q9BT88 431 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 C17orf75Q9HAS0 396 aa17.64■□□□□ 0.41
CNOT3-208ENST00000613073 OATP04181 439 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 YBX3P16989 372 aaKnown RBP eCLIP17.63■□□□□ 0.416e-10■■□□□ 13.4
CNOT3-208ENST00000613073 TAF4BQ92750 862 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 ZNF570Q96NI8 536 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 TXNRD2Q9NNW7 524 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 FBXO40Q9UH90 709 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 MAFBQ9Y5Q3 323 aaPredicted RBP17.63■□□□□ 0.41
CNOT3-208ENST00000613073 OTOFQ9HC10 1997 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
CNOT3-208ENST00000613073 SMIM23A6NLE4 172 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 H0YGN5 161 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 ICAM3P32942 547 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 IFI16Q16666 785 aaKnown RBP17.63■□□□□ 0.41
CNOT3-208ENST00000613073 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 WDR78Q5VTH9 848 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 LMBRD2Q68DH5 695 aaPredicted RBP17.63■□□□□ 0.41
CNOT3-208ENST00000613073 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
CNOT3-208ENST00000613073 SLC35G2Q8TBE7 412 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 TAS1R2Q8TE23 839 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 AGPAT1Q99943 283 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 THAP2Q9H0W7 228 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 NFS1Q9Y697 457 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 ARID2Q68CP9 1835 aa17.63■□□□□ 0.41
CNOT3-208ENST00000613073 LRRIQ4A6NIV6 560 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 CCT8L1PA6NM43 557 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 MAPK13O15264 365 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 P4HA2O15460 535 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 KIF4AO95239 1232 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 KIF22Q14807 665 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 KRT39Q6A163 491 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 CCDC197Q8NCU1 140 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 ARHGEF26Q96DR7 871 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 CDCA5Q96FF9 252 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 FARP2O94887 1054 aaPredicted RBP17.62■□□□□ 0.41
CNOT3-208ENST00000613073 SGPL1O95470 568 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 ECHS1P30084 290 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 PPATQ06203 517 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 Q3C1V9 767 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 PEX26Q7Z412 305 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 ERO1BQ86YB8 467 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 ASAP3Q8TDY4 903 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 CTNNBL1Q8WYA6 563 aaPredicted RBP17.62■□□□□ 0.41
CNOT3-208ENST00000613073 KREMEN1Q96MU8 473 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 SELENOSQ9BQE4 189 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 PI4K2AQ9BTU6 479 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 EBF2Q9HAK2 575 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 ARHGAP28Q9P2N2 729 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
CNOT3-208ENST00000613073 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 C5orf60A6NFR6 353 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 HGSO14964 777 aaPredicted RBP17.62■□□□□ 0.41
CNOT3-208ENST00000613073 CYP26A1O43174 497 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 RFX1P22670 979 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 LIG4P49917 911 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 KCNJ2P63252 427 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 ANKRD13AQ8IZ07 590 aa17.62■□□□□ 0.41
CNOT3-208ENST00000613073 RPUSD2Q8IZ73 545 aaKnown RBP17.62■□□□□ 0.41
CNOT3-208ENST00000613073 PCYT2Q99447 389 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms