RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 SLC38A7Q9NVC3 462 aa17.99■□□□□ 0.47
CCDC28A-202ENST00000611852 MAN1B1Q9UKM7 699 aa17.99■□□□□ 0.47
CCDC28A-202ENST00000611852 F8W810 466 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 GPT2Q8TD30 523 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 C18orf25Q96B23 403 aaPredicted RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 COLEC11Q9BWP8 271 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 GTPBP4Q9BZE4 634 aaKnown RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 CLSTN2Q9H4D0 955 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 GOLGA2P5Q9HBQ8 144 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 PUF60Q9UHX1 559 aaKnown RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 ANK1P16157 1881 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 PRCPP42785 496 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 CYP2J2P51589 502 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 HSP90AA2PQ14568 343 aaPredicted RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 ZBTB6Q15916 424 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 COBLL1Q53SF7 1204 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 ISM2Q6H9L7 571 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 JADE1Q6IE81 842 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 DDX53Q86TM3 631 aaKnown RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 BRSK2Q8IWQ3 736 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 NOC3LQ8WTT2 800 aaKnown RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 TMEM174Q8WUU8 243 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 KIF12Q96FN5 646 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 FBXL18Q96ME1 805 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 UROC1Q96N76 676 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 TSPAN18Q96SJ8 248 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 VN1R3Q9BXE9 311 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 ASB7Q9H672 318 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 RBAKQ9NYW8 714 aaPredicted RBP17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 TRAF3IP3Q9Y228 551 aa17.98■□□□□ 0.47
CCDC28A-202ENST00000611852 ATG2AQ2TAZ0 1938 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 IL18RAPO95256 599 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 BMP6P22004 513 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 CLCNKBP51801 687 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 WNT7BP56706 349 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 ERVFC1P60507 584 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 UPP1Q16831 310 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 CBWD2Q8IUF1 395 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 XXYLT1Q8NBI6 393 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 KIAA1586Q9HCI6 787 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 TLR9Q9NR96 1032 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 DMAC2Q9NW81 257 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 KIAA1468Q9P260 1216 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 TUBGCP4Q9UGJ1 667 aa17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 UBQLN1Q9UMX0 589 aaKnown RBP17.97■□□□□ 0.47
CCDC28A-202ENST00000611852 ZNF233A6NK53 670 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 BIN1O00499 593 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 CSPG5O95196 566 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 KIF4AO95239 1232 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 EFEMP2O95967 443 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 NFICP08651 508 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 IRS1P35568 1242 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 MORC3Q14149 939 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 SNRNP35Q16560 246 aaKnown RBP17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 SLC9A9Q8IVB4 645 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 ADSSL1Q8N142 457 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 ADAM28Q9UKQ2 775 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 DERAQ9Y315 318 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 C2CD2Q9Y426 696 aa17.96■□□□□ 0.47
CCDC28A-202ENST00000611852 FSCN2O14926 492 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 CALUO43852 315 aaPredicted RBP17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 EXOC3O60645 756 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 NR3C1P04150 777 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 CYP3A5P20815 502 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 IGFBP6P24592 240 aaPredicted RBP17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 RPL9P32969 192 aaKnown RBP17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 MCM4P33991 863 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 TMEM132DQ14C87 1099 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 ZCWPW2Q504Y3 356 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 DCLRE1AQ6PJP8 1040 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 RNF168Q8IYW5 571 aaPredicted RBP17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 VPS52Q8N1B4 723 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 MICALL1Q8N3F8 863 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 TMEM130Q8N3G9 435 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 RDH13Q8NBN7 331 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 TCF25Q9BQ70 676 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 NUP62CLQ9H1M0 184 aa17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.95■□□□□ 0.46
CCDC28A-202ENST00000611852 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 PODXLO00592 558 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 XPOTO43592 962 aaKnown RBP17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 TADA2AO75478 443 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 B3GAT3O94766 335 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 MYBPC2Q14324 1141 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 NFIL3Q16649 462 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 TIGD5Q53EQ6 642 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 SPATA1Q5VX52 437 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 CENPPQ6IPU0 288 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 FUT10Q6P4F1 479 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 CD300LGQ6UXG3 332 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 EFCAB13Q8IY85 973 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 TRIML1Q8N9V2 468 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 C3orf58Q8NDZ4 430 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 MICAL1Q8TDZ2 1067 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 HASPINQ8TF76 798 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 GPR62Q9BZJ7 368 aa17.94■□□□□ 0.46
CCDC28A-202ENST00000611852 ZBP1Q9H171 429 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms