RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	USP15	Q9Y4E8	981 aa	Predicted RBP	12.2	□□□□□ -0.46
FGFR2-223	ENST00000611527	PCDHA5	Q9Y5H7	936 aa		12.2	□□□□□ -0.46
FGFR2-223	ENST00000611527	TECTA	O75443	2155 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527		A0A0B4J269	797 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	ARL5C	A6NH57	179 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	OGT	O15294	1046 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	INPPL1	O15357	1258 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	FAM189A1	O60320	539 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	OFD1	O75665	1012 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	MBD3	O95983	291 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	CXCL8	P10145	99 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	LAG3	P18627	525 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	ADSS	P30520	456 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	SCNN1G	P51170	649 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	AFF1	P51825	1210 aa	Known RBP	12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	ERVFC1	P60507	584 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	UBE3A	Q05086	875 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	ARMCX5	Q6P1M9	558 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	HFE2	Q6ZVN8	426 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	SPATA20	Q8TB22	786 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	ZNF507	Q8TCN5	953 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	RSPH1	Q8WYR4	309 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	POMGNT1	Q8WZA1	660 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	SNX27	Q96L92	541 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	GSDMA	Q96QA5	445 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	CBWD1	Q9BRT8	395 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	GBP3	Q9H0R5	595 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	CWH43	Q9H720	699 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	UBN1	Q9NPG3	1134 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	TBC1D13	Q9NVG8	400 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	STYXL1	Q9Y6J8	313 aa		12.19	□□□□□ -0.46
FGFR2-223	ENST00000611527	WDFY4	Q6ZS81	3184 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	FSCN2	O14926	492 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	TGFB1I1	O43294	461 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	B4GALT3	O60512	393 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	POMC	P01189	267 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	PBX3	P40426	434 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	TNFSF9	P41273	254 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	YARS	P54577	528 aa	Known RBP	12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	RNASEL	Q05823	741 aa	Known RBP	12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	KNOP1	Q1ED39	458 aa	Known RBP	12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	GLRA4	Q5JXX5	417 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	SLFN12L	Q6IEE8	588 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	LRRC55	Q6ZSA7	311 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	HS2ST1	Q7LGA3	356 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	SAAL1	Q96ER3	474 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	ACAP3	Q96P50	834 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	CXCL16	Q9H2A7	254 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	AGPAT3	Q9NRZ7	376 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	TOPORS	Q9NS56	1045 aa	Predicted RBP	12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	AGO2	Q9UKV8	859 aa	Known RBP	12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	MAPK8IP1	Q9UQF2	711 aa		12.18	□□□□□ -0.46
FGFR2-223	ENST00000611527	LOC730098	B7Z3J9	87 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	BIN1	O00499	593 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	PTGES	O14684	152 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	MEFV	O15553	781 aa	Predicted RBP	12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	CLTA	P09496	248 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	GART	P22102	1010 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	ACOT2	P49753	483 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	CYP2J2	P51589	502 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	GRIK3	Q13003	919 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	ENOX2	Q16206	610 aa	Known RBP	12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	DUSP6	Q16828	381 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	ZNF658	Q5TYW1	1059 aa	Predicted RBP	12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	PLPP4	Q5VZY2	271 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	GUF1	Q8N442	669 aa	Known RBP	12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	ZSWIM2	Q8NEG5	633 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	NOC3L	Q8WTT2	800 aa	Known RBP	12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	KCTD10	Q9H3F6	313 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	PCIF1	Q9H4Z3	704 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	ENTPD7	Q9NQZ7	604 aa		12.17	□□□□□ -0.46
FGFR2-223	ENST00000611527	GOLGA8IP	A6NC78	632 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	GOLGA8J	A6NMD2	632 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	CLIC2	O15247	247 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	KIF20A	O95235	890 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	PLCB3	Q01970	1234 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	PPP2R3A	Q06190	1150 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	KYAT1	Q16773	422 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	ISM2	Q6H9L7	571 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	PDE12	Q6L8Q7	609 aa	Known RBP	12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	KCNT2	Q6UVM3	1135 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	GSTCD	Q8NEC7	633 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	GOLGA5	Q8TBA6	731 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	EDA	Q92838	391 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	FBXL18	Q96ME1	805 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	ZNF558	Q96NG5	402 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	CDCA3	Q99618	268 aa	Predicted RBP	12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	TCF25	Q9BQ70	676 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	FAM213A	Q9BRX8	229 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	PHF7	Q9BWX1	381 aa	Predicted RBP	12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	NRDE2	Q9H7Z3	1164 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	RPF1	Q9H9Y2	349 aa	Known RBP	12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	MIOS	Q9NXC5	875 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	HSPBP1	Q9NZL4	362 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	CNTN3	Q9P232	1028 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	KIAA1468	Q9P260	1216 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	DNAJB4	Q9UDY4	337 aa		12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	CPSF3	Q9UKF6	684 aa	Known RBP	12.16	□□□□□ -0.46
FGFR2-223	ENST00000611527	LZTS1	Q9Y250	596 aa		12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms