RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SPP2Q13103 211 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 ANKS1BQ7Z6G8 1248 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 CBX6O95503 412 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 PDHA1P08559 390 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 MSH2P43246 934 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 MFAP3P55082 362 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 NOP14P78316 857 aaKnown RBP21.75■■□□□ 1.07
SSBP3-216ENST00000610401 P3H1Q32P28 736 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 IZUMO3Q5VZ72 239 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 CYFIP1Q7L576 1253 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 CERKQ8TCT0 537 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 DONSONQ9NYP3 566 aa21.75■■□□□ 1.07
SSBP3-216ENST00000610401 ECE2O60344 883 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 ADSSP30520 456 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 HOXA7P31268 230 aaPredicted RBP21.74■■□□□ 1.07
SSBP3-216ENST00000610401 SCARA3Q6AZY7 606 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 FHDC1Q9C0D6 1143 aaPredicted RBP21.74■■□□□ 1.07
SSBP3-216ENST00000610401 CCPG1Q9ULG6 757 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 DENND3A2RUS2 1198 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 CGB2Q6NT52 195 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 ECHDC2Q86YB7 292 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 SNF8Q96H20 258 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 RUNDC3BQ96NL0 473 aa21.74■■□□□ 1.07
SSBP3-216ENST00000610401 ZMYND8Q9ULU4 1186 aaPredicted RBP21.74■■□□□ 1.07
SSBP3-216ENST00000610401 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
SSBP3-216ENST00000610401 YWHABP31946 246 aaKnown RBP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 RARRES1P49788 294 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 PPP2R5CQ13362 524 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ZNF570Q96NI8 536 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 NT5C1BQ96P26 610 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 RBM15Q96T37 977 aaKnown RBP eCLIP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 CNOT7Q9UIV1 285 aaKnown RBP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ZNF148Q9UQR1 794 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 EXOC1LA0A1B0GW35 172 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ENO4A6NNW6 628 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ATP9AO75110 1047 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 TNNI1P19237 187 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 CNGA1P29973 690 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ACOT2P49753 483 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 DRG2P55039 364 aaKnown RBP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 FAM71AQ8IYT1 594 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 CD101Q93033 1021 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ZDHHC15Q96MV8 337 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 NKX1-2Q9UD57 310 aaPredicted RBP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 C15orf41Q9Y2V0 281 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 HNRNPDLO14979 420 aaKnown RBP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 RAD17O75943 681 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 GAS8O95995 478 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 CHRNA5P30532 468 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 TAS2R40P59535 323 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 NAIF1Q69YI7 327 aaPredicted RBP21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ATP6V0A4Q9HBG4 840 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 ARL2BPQ9Y2Y0 163 aa21.73■■□□□ 1.07
SSBP3-216ENST00000610401 MYCNP04198 464 aaPredicted RBP21.72■■□□□ 1.07
SSBP3-216ENST00000610401 SV2AQ7L0J3 742 aa21.72■■□□□ 1.07
SSBP3-216ENST00000610401 MYLK2Q9H1R3 596 aa21.72■■□□□ 1.07
SSBP3-216ENST00000610401 GCKP35557 465 aa21.72■■□□□ 1.07
SSBP3-216ENST00000610401 ZNF131P52739 623 aa21.72■■□□□ 1.07
SSBP3-216ENST00000610401 RPS6KC1Q96S38 1066 aa21.72■■□□□ 1.07
SSBP3-216ENST00000610401 RAVER2Q9HCJ3 691 aaKnown RBP21.72■■□□□ 1.07
SSBP3-216ENST00000610401 GMCL1Q96IK5 515 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 RAB20Q9NX57 234 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 SEL1LQ9UBV2 794 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 LACTBP83111 547 aaPredicted RBP21.71■■□□□ 1.07
SSBP3-216ENST00000610401 GAD2Q05329 585 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 NOP53Q9NZM5 478 aaKnown RBP21.71■■□□□ 1.07
SSBP3-216ENST00000610401 HSPA6P17066 643 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 CA4P22748 312 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 ATP11AP98196 1134 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 CDR2Q01850 454 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 PKN2Q16513 984 aaKnown RBP21.71■■□□□ 1.07
SSBP3-216ENST00000610401 KRT39Q6A163 491 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 PSPC1Q8WXF1 523 aaKnown RBP21.71■■□□□ 1.07
SSBP3-216ENST00000610401 YIPF3Q9GZM5 350 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 TMEM39BQ9GZU3 492 aa21.71■■□□□ 1.07
SSBP3-216ENST00000610401 A0A1W2PPM1 405 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 WDR4P57081 412 aaKnown RBP21.7■■□□□ 1.06
SSBP3-216ENST00000610401 MEX3CQ5U5Q3 659 aaKnown RBP21.7■■□□□ 1.06
SSBP3-216ENST00000610401 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 CKAP2Q8WWK9 683 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 ADAM22Q9P0K1 906 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 GTF3C4Q9UKN8 822 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 MMP10P09238 476 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 PLS3P13797 630 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 ADRA2BP18089 450 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 NRLP54845 237 aa21.7■■□□□ 1.06
SSBP3-216ENST00000610401 TRMT10CQ7L0Y3 403 aaKnown RBP21.7■■□□□ 1.06
SSBP3-216ENST00000610401 NSFP46459 744 aaKnown RBP21.69■■□□□ 1.06
SSBP3-216ENST00000610401 TMEM270Q6UE05 265 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 ZBED8Q8IZ13 594 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 FBXL13Q8NEE6 735 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 HELQQ8TDG4 1101 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 DCLK3Q9C098 648 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 TMEM206Q9H813 350 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 NEFHP12036 1026 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 HOXA10P31260 410 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-216ENST00000610401 EFTUD2Q15029 972 aaKnown RBP eCLIP21.69■■□□□ 1.064e-7■■■■■ 32.3
SSBP3-216ENST00000610401 TAF11Q15544 211 aa21.69■■□□□ 1.06
SSBP3-216ENST00000610401 EAPPQ56P03 285 aaPredicted RBP21.69■■□□□ 1.06
SSBP3-216ENST00000610401 ACAD10Q6JQN1 1059 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms