RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 FAM213AQ9BRX8 229 aa10.29□□□□□ -0.76
SQSTM1P1-201ENST00000603451 NRDE2Q9H7Z3 1164 aa10.29□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PUF60Q9UHX1 559 aaKnown RBP10.29□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TRANK1O15050 2925 aa10.29□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ARHGEF37A1IGU5 675 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CETN3O15182 167 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TRAPPC3O43617 180 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 POMCP01189 267 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ALDH2P05091 517 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 GALTP07902 379 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 MYOGP15173 224 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 BMP6P22004 513 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ERCC5P28715 1186 aaPredicted RBP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ACOT2P49753 483 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CYP2J2P51589 502 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 OSTNP61366 133 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CLDN10P78369 228 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CREMQ03060 361 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 CYP24A1Q07973 514 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ZBTB6Q15916 424 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 SPATA1Q5VX52 437 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TMC2Q8TDI7 906 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ERCC4Q92889 916 aaPredicted RBP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 IGSF21Q96ID5 467 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LRCH3Q96II8 777 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 MFSD14AQ96MC6 490 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 C17orf80Q9BSJ5 609 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 COLEC11Q9BWP8 271 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 KLK14Q9P0G3 267 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 RWDD2AQ9UIY3 292 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ITGA11Q9UKX5 1188 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 PLAGL2Q9UPG8 496 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 FAN1Q9Y2M0 1017 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 ATG2AQ2TAZ0 1938 aa10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LAMA2P24043 3122 aaKnown RBP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 SF3B1O75533 1304 aaKnown RBP eCLIP10.28□□□□□ -0.76
SQSTM1P1-201ENST00000603451 LACTBL1A8MY62 500 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PPP1R3GB7ZBB8 358 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NRP1O14786 923 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 IKBKBO14920 756 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MEFVO15553 781 aaPredicted RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 STX10O60499 249 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FGF18O76093 207 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DDHD2O94830 711 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GNA14O95837 355 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 EFEMP2O95967 443 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 C1RP00736 705 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PSMC2P35998 433 aaKnown RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PNPLA4P41247 253 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SLC11A1P49279 550 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 AFF1P51825 1210 aaKnown RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 NLRP12P59046 1061 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ADAM9Q13443 819 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 STX1AQ16623 288 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 UPP1Q16831 310 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TIGD5Q53EQ6 642 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZBTB41Q5SVQ8 909 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TTI2Q6NXR4 508 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PDXDC1Q6P996 788 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DCLRE1AQ6PJP8 1040 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SASS6Q6UVJ0 657 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DDX53Q86TM3 631 aaKnown RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZNF280BQ86YH2 543 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CBWD2Q8IUF1 395 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 RNF168Q8IYW5 571 aaPredicted RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 LRRC52Q8N7C0 313 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PPP2R3CQ969Q6 453 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ANKRD36BP1Q96IX9 119 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZNF560Q96MR9 790 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ZMAT2Q96NC0 199 aaKnown RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 FNBP1Q96RU3 617 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CGRRF1Q99675 332 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 IKZF4Q9H2S9 585 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SEMA6BQ9H3T3 888 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 METTL14Q9HCE5 456 aaKnown RBP10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ANO10Q9NW15 660 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MIOSQ9NXC5 875 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 DNAJB4Q9UDY4 337 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ADAM28Q9UKQ2 775 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 MAPK8IP1Q9UQF2 711 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SSX2IPQ9Y2D8 614 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 IRAK3Q9Y616 596 aa10.27□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TSC2P49815 1807 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 BIN1O00499 593 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CLIC2O15247 247 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 CAVIN2O95810 425 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TNNC2P02585 160 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 SOD2P04179 222 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 ITGB1P05556 798 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 TMEM191BP0C7N4 346 aa10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 EPB41P11171 864 aaKnown RBP10.26□□□□□ -0.77
SQSTM1P1-201ENST00000603451 KRT13P13646 458 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms