RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 IL23AQ9NPF7 189 aa24.84■■□□□ 1.57
IRF3-227ENST00000600911 CACNG4Q9UBN1 327 aa24.84■■□□□ 1.57
IRF3-227ENST00000600911 PRKAG2Q9UGJ0 569 aa24.84■■□□□ 1.57
IRF3-227ENST00000600911 VNN1O95497 513 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 DEFB103AP81534 67 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 UBXN1Q04323 297 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 SOX4Q06945 474 aaPredicted RBP24.83■■□□□ 1.57
IRF3-227ENST00000600911 KYAT1Q16773 422 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 DPY19L2P1Q6NXN4 242 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 ANKRD20A12PQ8NF67 263 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 SEMA4DQ92854 862 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 TUBGCP4Q9UGJ1 667 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 SCN1AP35498 2009 aa24.83■■□□□ 1.57
IRF3-227ENST00000600911 SMIM28A0A1B0GU29 152 aa24.83■■□□□ 1.56
IRF3-227ENST00000600911 IL18RAPO95256 599 aa24.83■■□□□ 1.56
IRF3-227ENST00000600911 YARSP54577 528 aaKnown RBP24.83■■□□□ 1.56
IRF3-227ENST00000600911 WDR49Q8IV35 697 aa24.83■■□□□ 1.56
IRF3-227ENST00000600911 CXorf38Q8TB03 319 aa24.83■■□□□ 1.56
IRF3-227ENST00000600911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.83■■□□□ 1.564e-7■■■■■ 61.3
IRF3-227ENST00000600911 C1orf112Q9NSG2 853 aa24.83■■□□□ 1.56
IRF3-227ENST00000600911 ARL5CA6NH57 179 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 SCNN1GP51170 649 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 TFAMQ00059 246 aaKnown RBP24.82■■□□□ 1.56
IRF3-227ENST00000600911 POU5F1Q01860 360 aaKnown RBP24.82■■□□□ 1.56
IRF3-227ENST00000600911 NAB2Q15742 525 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 ZBTB6Q15916 424 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 OTOP2Q7RTS6 562 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 LMO3Q8TAP4 145 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 TAS1R2Q8TE23 839 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 KIF12Q96FN5 646 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 ASB7Q9H672 318 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 RSAD1Q9HA92 442 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 GOLGA2P5Q9HBQ8 144 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 SIK3Q9Y2K2 1263 aa24.82■■□□□ 1.56
IRF3-227ENST00000600911 B4GALT3O60512 393 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 OFD1O75665 1012 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 SLC9A1P19634 815 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 IGFBP6P24592 240 aaPredicted RBP24.81■■□□□ 1.56
IRF3-227ENST00000600911 MXI1P50539 228 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 MYL7Q01449 175 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 FPGSQ05932 587 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 ENPEPQ07075 957 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 IKBKEQ14164 716 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 SYCP1Q15431 976 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 ZACNQ401N2 412 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 EPC2Q52LR7 807 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 ZNF365Q70YC5 407 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 C1orf127Q8N9H9 656 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 HELQQ8TDG4 1101 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.81■■□□□ 1.561e-10■■□□□ 11.4
IRF3-227ENST00000600911 PLEKHA5Q9HAU0 1116 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 TMEM8AQ9HCN3 771 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 SIX4Q9UIU6 781 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 GIT1Q9Y2X7 761 aa24.81■■□□□ 1.56
IRF3-227ENST00000600911 PPEF2O14830 753 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 EPHB6O15197 1021 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 CST3P01034 146 aaPredicted RBP24.8■■□□□ 1.56
IRF3-227ENST00000600911 ACTN1P12814 892 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 WDR5P61964 334 aaKnown RBP24.8■■□□□ 1.56
IRF3-227ENST00000600911 TMEM132DQ14C87 1099 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 PPP1R10Q96QC0 940 aaKnown RBP24.8■■□□□ 1.56
IRF3-227ENST00000600911 TMEM161AQ9NX61 479 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 HCSTQ9UBK5 93 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 INPP5FQ9Y2H2 1132 aa24.8■■□□□ 1.56
IRF3-227ENST00000600911 POMCP01189 267 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 KCNE1P15382 129 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 FILIP1LQ4L180 1135 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 TMEM240Q5SV17 173 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 TRAPPC11Q7Z392 1133 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 PI4K2AQ9BTU6 479 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 SIX2Q9NPC8 291 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 CXXC1Q9P0U4 656 aaPredicted RBP24.79■■□□□ 1.56
IRF3-227ENST00000600911 TNRC18O15417 2968 aaPredicted RBP24.79■■□□□ 1.56
IRF3-227ENST00000600911 LAMA2P24043 3122 aaKnown RBP24.79■■□□□ 1.56
IRF3-227ENST00000600911 EOMESO95936 686 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 PPIGQ13427 754 aaKnown RBP eCLIP24.79■■□□□ 1.563e-8■■■■□ 19.9
IRF3-227ENST00000600911 SURF1Q15526 300 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 KRT39Q6A163 491 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 RPUSD2Q8IZ73 545 aaKnown RBP24.79■■□□□ 1.56
IRF3-227ENST00000600911 PGBD4Q96DM1 585 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 MRFAP1L1Q96HT8 127 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 ERGIC2Q96RQ1 377 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 ELAC1Q9H777 363 aaKnown RBP24.79■■□□□ 1.56
IRF3-227ENST00000600911 AJAP1Q9UKB5 411 aaPredicted RBP24.79■■□□□ 1.56
IRF3-227ENST00000600911 C2CD2Q9Y426 696 aa24.79■■□□□ 1.56
IRF3-227ENST00000600911 UPP2O95045 317 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 SKIP12755 728 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 GTF2H1P32780 548 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 VSTM4Q8IW00 320 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 CD302Q8IX05 232 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 GCNT4Q9P109 453 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 COQ4Q9Y3A0 265 aa24.78■■□□□ 1.56
IRF3-227ENST00000600911 ABHD14A-ACY1A0A1B0GW23 586 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 RNF225M0QZC1 329 aaPredicted RBP24.77■■□□□ 1.56
IRF3-227ENST00000600911 CBFA2T2O43439 604 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 HLA-DRAP01903 254 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 PFKMP08237 780 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 TMEM191BP0C7N4 346 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 PON1P27169 355 aa24.77■■□□□ 1.56
IRF3-227ENST00000600911 BIRC3Q13489 604 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms