RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 SNRNP35Q16560 246 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 SLC39A11Q8N1S5 342 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 KLHL23Q8NBE8 558 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 KIF12Q96FN5 646 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 TMEM169Q96HH4 297 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 ZMAT2Q96NC0 199 aaKnown RBP16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 GAS2L1Q99501 681 aaPredicted RBP16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 COLEC11Q9BWP8 271 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 LMAN2LQ9H0V9 348 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 CXCL16Q9H2A7 254 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 DMAC2Q9NW81 257 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 STK39Q9UEW8 545 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 C2CD2Q9Y426 696 aa16.39■□□□□ 0.21
GTF2F1-206ENST00000598607 SCN1AP35498 2009 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 BICDL2A1A5D9 508 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 B4GALT3O60512 393 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 FGF18O76093 207 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 CYP3A5P20815 502 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 BMP6P22004 513 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 NR2F2P24468 414 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 TMEM132DQ14C87 1099 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 ZCWPW2Q504Y3 356 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 MLKLQ8NB16 471 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 ZSWIM2Q8NEG5 633 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 BEST2Q8NFU1 509 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 DDX27Q96GQ7 796 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 IGSF21Q96ID5 467 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 PRDM12Q9H4Q4 367 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 PUF60Q9UHX1 559 aaKnown RBP16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 DACH1Q9UI36 760 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 LZTS1Q9Y250 596 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 FRMD4BQ9Y2L6 1034 aa16.38■□□□□ 0.21
GTF2F1-206ENST00000598607 VWA8A3KMH1 1905 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 CASTOR2A6NHX0 329 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 PPP1R3GB7ZBB8 358 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 NT5C1B-RDH14C9J2C7 533 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 CETN3O15182 167 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 MAPK13O15264 365 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 ITGB1P05556 798 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 RPL9P32969 192 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 PBX3P40426 434 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 NLRP12P59046 1061 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 ADAM9Q13443 819 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 ZBTB6Q15916 424 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 PTPROQ16827 1216 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 KLHL40Q2TBA0 621 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 FOXR2Q6PJQ5 311 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 Q7L0L9 218 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 RDH13Q8NBN7 331 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 GDPD5Q8WTR4 605 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 CACTINQ8WUQ7 758 aaKnown RBP16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 PRG3Q9Y2Y8 225 aaPredicted RBP16.37■□□□□ 0.21
GTF2F1-206ENST00000598607 EPOPA6NHQ4 379 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 CD44P16070 742 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 FKBP3Q00688 224 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 SPAG1Q07617 926 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 CYP24A1Q07973 514 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 PAK1Q13153 545 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 SPATA1Q5VX52 437 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 CEP135Q66GS9 1140 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 KLHL10Q6JEL2 608 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 DCLRE1AQ6PJP8 1040 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 USP37Q86T82 979 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 SPPL3Q8TCT6 385 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 FNBP1Q96RU3 617 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 MKNK1Q9BUB5 465 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 ALG13Q9NP73 1137 aaKnown RBP16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 MTMR10Q9NXD2 777 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 CTNND2Q9UQB3 1225 aa16.36■□□□□ 0.21
GTF2F1-206ENST00000598607 CHD9Q3L8U1 2897 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 TMEM189-UBE2V1I3L0A0 370 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 RFXAPO00287 272 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 TULP1O00294 542 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 NFICP08651 508 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 TMEM191BP0C7N4 346 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 LRPAP1P30533 357 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 PSMC2P35998 433 aaKnown RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 CLCNKBP51801 687 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 SOX4Q06945 474 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 BMS1Q14692 1282 aaKnown RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 PSMD6Q15008 389 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 UPP1Q16831 310 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 ANKRD40Q6AI12 368 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 SASS6Q6UVJ0 657 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 DDX53Q86TM3 631 aaKnown RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 WDR49Q8IV35 697 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 POF1BQ8WVV4 589 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 C18orf25Q96B23 403 aaPredicted RBP16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 ANKRD36BP1Q96IX9 119 aa16.35■□□□□ 0.21
GTF2F1-206ENST00000598607 MFSD14AQ96MC6 490 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms