RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PSMD5Q16401 504 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 UPP1Q16831 310 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 XKR4Q5GH76 650 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 LILRA6Q6PI73 481 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 HAUS6Q7Z4H7 955 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 KCTD17Q8N5Z5 321 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 MYCT1Q8N699 235 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 ZNF707Q96C28 371 aaPredicted RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 BICD1Q96G01 975 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 INTS4Q96HW7 963 aaKnown RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 ACAP3Q96P50 834 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.05■□□□□ -0
SCAF1-203ENST00000598359 TOPORSQ9NS56 1045 aaPredicted RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 LARSQ9P2J5 1176 aaKnown RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 KMT2EQ8IZD2 1858 aa15.05■□□□□ -0
SCAF1-203ENST00000598359 PTPRZ1P23471 2315 aaPredicted RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 ZFHX2Q9C0A1 2572 aaPredicted RBP15.05■□□□□ -0
SCAF1-203ENST00000598359 MYH11P35749 1972 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 TRIP11Q15643 1979 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 DENND4AQ7Z401 1863 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 K7ENM7 598 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 SLC26A4O43511 780 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 N4BP1O75113 896 aaKnown RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 BRD1O95696 1058 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 TKTP29401 623 aaKnown RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 DDIT3P35638 169 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 SPAG1Q07617 926 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 ZBTB41Q5SVQ8 909 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 FOXD4L5Q5VV16 416 aaPredicted RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 DCLRE1AQ6PJP8 1040 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 RSPO2Q6UXX9 243 aaPredicted RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 CCDC149Q6ZUS6 474 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 PRSS33Q8NF86 280 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 FOXD4L4Q8WXT5 416 aaPredicted RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 PIK3R5Q8WYR1 880 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 SMG7Q92540 1137 aaKnown RBP15.04■□□□□ -0
SCAF1-203ENST00000598359 PBXIP1Q96AQ6 731 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 USP28Q96RU2 1077 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 ODF2LQ9ULJ1 636 aa15.04■□□□□ -0
SCAF1-203ENST00000598359 TMEM189-UBE2V1I3L0A0 370 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 PODXLO00592 558 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 CLDN3O15551 220 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 STX6O43752 255 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 PDGFBP01127 241 aaPredicted RBP15.03■□□□□ -0
SCAF1-203ENST00000598359 CXCL8P10145 99 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 FGFR3P22607 806 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 NMT1P30419 496 aaKnown RBP15.03■□□□□ -0
SCAF1-203ENST00000598359 TNFSF9P41273 254 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 PTPN5P54829 565 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 MCL1Q07820 350 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 SIGLEC14Q08ET2 396 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 SLC10A6Q3KNW5 377 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 ZPBP2Q6X784 338 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
SCAF1-203ENST00000598359 C15orf39Q6ZRI6 1047 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 DYMQ7RTS9 669 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 GPR65Q8IYL9 337 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 ZDHHC14Q8IZN3 488 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 LARP4BQ92615 738 aaKnown RBP15.03■□□□□ -0
SCAF1-203ENST00000598359 ASIC4Q96FT7 647 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 UROC1Q96N76 676 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 PANK2Q9BZ23 570 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 CCSER1Q9C0I3 900 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 IKZF4Q9H2S9 585 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 PARVGQ9HBI0 331 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 CNTN3Q9P232 1028 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 TUBGCP4Q9UGJ1 667 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 TBX20Q9UMR3 447 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 SRPRBQ9Y5M8 271 aaKnown RBP15.03■□□□□ -0
SCAF1-203ENST00000598359 VWA8A3KMH1 1905 aa15.03■□□□□ -0
SCAF1-203ENST00000598359 MYO15AQ9UKN7 3530 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 CLUHO75153 1309 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 TBCAO75347 108 aaKnown RBP15.02■□□□□ -0
SCAF1-203ENST00000598359 KCNE1P15382 129 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 OR1D2P34982 312 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 LIG4P49917 911 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 ZNF131P52739 623 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 CREMQ03060 361 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 ELAVL2Q12926 359 aaKnown RBP15.02■□□□□ -0
SCAF1-203ENST00000598359 ZC2HC1CQ53FD0 456 aaPredicted RBP15.02■□□□□ -0
SCAF1-203ENST00000598359 IER5LQ5T953 404 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 ST13P5Q8NFI4 369 aaPredicted RBP15.02■□□□□ -0
SCAF1-203ENST00000598359 ACSF2Q96CM8 615 aaPredicted RBP15.02■□□□□ -0
SCAF1-203ENST00000598359 DDX27Q96GQ7 796 aaKnown RBP15.02■□□□□ -0
SCAF1-203ENST00000598359 FIZ1Q96SL8 496 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 PLEKHA4Q9H4M7 779 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 PIDD1Q9HB75 910 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 DPP7Q9UHL4 492 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 FBXW11Q9UKB1 542 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 SORCS3Q9UPU3 1222 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 USTQ9Y2C2 406 aa15.02■□□□□ -0
SCAF1-203ENST00000598359 CACNA1HO95180 2353 aa15.01□□□□□ -0.01
SCAF1-203ENST00000598359 A0A087X0B3 334 aa15.01□□□□□ -0.01
SCAF1-203ENST00000598359 TISP43B9A030 160 aa15.01□□□□□ -0.01
SCAF1-203ENST00000598359 HNRNPDLO14979 420 aaKnown RBP15.01□□□□□ -0.01
SCAF1-203ENST00000598359 TRAK2O60296 914 aa15.01□□□□□ -0.01
SCAF1-203ENST00000598359 ZMYND10O75800 440 aa15.01□□□□□ -0.01
SCAF1-203ENST00000598359 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
SCAF1-203ENST00000598359 GUCY2FP51841 1108 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms