RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 PDXDC1Q6P996 788 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.19■□□□□ 0.5
USHBP1-208ENST00000598309 ZNF720Q7Z2F6 126 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 HASPINQ8TF76 798 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 PIK3R5Q8WYR1 880 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 B3GALT6Q96L58 329 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 ZMAT2Q96NC0 199 aaKnown RBP18.19■□□□□ 0.5
USHBP1-208ENST00000598309 TTPALQ9BTX7 342 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 APOL5Q9BWW9 433 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 C1QTNF1Q9BXJ1 281 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 TNMDQ9H2S6 317 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
USHBP1-208ENST00000598309 A0A0B4J269 797 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 PI4K2BG5E9Z4 385 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 OGTO15294 1046 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 FAM189A1O60320 539 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 B3GAT3O94766 335 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 RPL9P32969 192 aaKnown RBP18.18■□□□□ 0.5
USHBP1-208ENST00000598309 SOX4Q06945 474 aaPredicted RBP18.18■□□□□ 0.5
USHBP1-208ENST00000598309 RARS2Q5T160 578 aaKnown RBP18.18■□□□□ 0.5
USHBP1-208ENST00000598309 SHC4Q6S5L8 630 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 PDILTQ8N807 584 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 CMASQ8NFW8 434 aaPredicted RBP18.18■□□□□ 0.5
USHBP1-208ENST00000598309 HDAC7Q8WUI4 952 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 RIPOR3Q96MK2 946 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 TSPAN18Q96SJ8 248 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 STRA6Q9BX79 667 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 PANK2Q9BZ23 570 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
USHBP1-208ENST00000598309 TTC26A0AVF1 554 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 PODXLO00592 558 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 TRAPPC3O43617 180 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 CXCL8P10145 99 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 ALADP13716 330 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 FGFR3P22607 806 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 ME1P48163 572 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 DNM1Q05193 864 aaKnown RBP18.17■□□□□ 0.5
USHBP1-208ENST00000598309 ALCAMQ13740 583 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 FOXD4L6Q3SYB3 417 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-208ENST00000598309 SEZ6Q53EL9 994 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 ZC2HC1CQ53FD0 456 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-208ENST00000598309 SLFN12LQ6IEE8 588 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 SLC39A4Q6P5W5 647 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 CD300LGQ6UXG3 332 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 FOXD4L3Q6VB84 417 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-208ENST00000598309 IQUBQ8NA54 791 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 KHSRPQ92945 711 aaKnown RBP eCLIP18.17■□□□□ 0.5
USHBP1-208ENST00000598309 MSTO1Q9BUK6 570 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 RHOBTB2Q9BYZ6 727 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 MRPL44Q9H9J2 332 aaKnown RBP18.17■□□□□ 0.5
USHBP1-208ENST00000598309 MAGEF1Q9HAY2 307 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 GOLGA2P5Q9HBQ8 144 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 MAN1C1Q9NR34 630 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 KBTBD4Q9NVX7 518 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 STYXL1Q9Y6J8 313 aa18.17■□□□□ 0.5
USHBP1-208ENST00000598309 CITO14578 2027 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 DCXO43602 365 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 ADRB2P07550 413 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 PPP2R3AQ06190 1150 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 PSMD5Q16401 504 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 ATAT1Q5SQI0 421 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 PRSS55Q6UWB4 352 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-208ENST00000598309 C15orf39Q6ZRI6 1047 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 GPR149Q86SP6 731 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 C12orf76Q8N812 135 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-208ENST00000598309 C3orf58Q8NDZ4 430 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 LNX1Q8TBB1 728 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-208ENST00000598309 PLEKHA4Q9H4M7 779 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 EPHX3Q9H6B9 360 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 RCOR1Q9UKL0 485 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 PCDHA7Q9UN72 937 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 EXOC7Q9UPT5 735 aa18.16■□□□□ 0.5
USHBP1-208ENST00000598309 SPDYE4A6NLX3 237 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 PAPLNO95428 1278 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 IDEP14735 1019 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CYP3A5P20815 502 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 TNFSF9P41273 254 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 AMPD3Q01432 767 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 POU5F1Q01860 360 aaKnown RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 ENOX2Q16206 610 aaKnown RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 HERC4Q5GLZ8 1057 aaPredicted RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 L1TD1Q5T7N2 865 aaKnown RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CNNM4Q6P4Q7 775 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CYP26C1Q6V0L0 522 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CEP57Q86XR8 500 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 RNF135Q8IUD6 432 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CD302Q8IX05 232 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CCDC65Q8IXS2 484 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 C18orf25Q96B23 403 aaPredicted RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 DHX58Q96C10 678 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 RPGRIP1Q96KN7 1286 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 PYM1Q9BRP8 204 aaKnown RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 POMKQ9H5K3 350 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 RPF1Q9H9Y2 349 aaKnown RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 PANK4Q9NVE7 773 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 FAM13BQ9NYF5 915 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CDH22Q9UJ99 828 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 CPSF3Q9UKF6 684 aaKnown RBP18.15■□□□□ 0.5
USHBP1-208ENST00000598309 NR2E1Q9Y466 385 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 PCDHB13Q9Y5F0 798 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms