RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 NT5DC1Q5TFE4 455 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 ZC3H14Q6PJT7 736 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 PJA1Q8NG27 643 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 KIFAP3Q92845 792 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 UROC1Q96N76 676 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 PPP1R10Q96QC0 940 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 CCDC94Q9BW85 323 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 FOXP1Q9H334 677 aaPredicted RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 GOLGA2P5Q9HBQ8 144 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 DLGAP2Q9P1A6 1054 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 DNMT3BQ9UBC3 853 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 MTRRQ9UBK8 725 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 NOL7Q9UMY1 257 aaKnown RBP11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 KIAA1024Q9UPX6 916 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 COL4A3Q01955 1670 aa11.61□□□□□ -0.55
CHMP2A-202ENST00000596708 TCHHQ07283 1943 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 TICRRQ7Z2Z1 1910 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 KANSL1LA0AUZ9 987 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 TMEM189-UBE2V1I3L0A0 370 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 I3L4J1 428 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 GLULP15104 373 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 ELF1P32519 619 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 PEX3P56589 373 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 OSTNP61366 133 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 PFKPQ01813 784 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 PRKCQQ04759 706 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 UBXN2BQ14CS0 331 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 MLF2Q15773 248 aaPredicted RBP11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 UPP1Q16831 310 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 ANKS3Q6ZW76 656 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 ERMP1Q7Z2K6 904 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 FAM184AQ8NB25 1140 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 ING5Q8WYH8 240 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 MCRS1Q96EZ8 462 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 DDX19AQ9NUU7 478 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 LIMCH1Q9UPQ0 1083 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 TNFSF13BQ9Y275 285 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 MRPS23Q9Y3D9 190 aaKnown RBP11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 BACE2Q9Y5Z0 518 aa11.6□□□□□ -0.55
CHMP2A-202ENST00000596708 SMIM28A0A1B0GU29 152 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 FAM170BA6NMN3 283 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 LRG1P02750 347 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 PTPN2P17706 415 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 ARPP19P56211 112 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 NBR1Q14596 966 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 ZNF568Q3ZCX4 644 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 CD300LGQ6UXG3 332 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 RSPO2Q6UXX9 243 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 RTL10Q7L3V2 364 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 NPAS3Q8IXF0 933 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 KIAA2013Q8IYS2 634 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 CEP120Q8N960 986 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 SNX29Q8TEQ0 813 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 LLPHQ9BRT6 129 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 TCHPQ9BT92 498 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 MRPL4Q9BYD3 311 aaKnown RBP11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 KMT5AQ9NQR1 393 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 TOPORSQ9NS56 1045 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 SPATA6Q9NWH7 488 aaPredicted RBP11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 KCNH3Q9ULD8 1083 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 DNM3Q9UQ16 869 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 STK24Q9Y6E0 443 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 F5P12259 2224 aa11.59□□□□□ -0.55
CHMP2A-202ENST00000596708 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 ATG2BQ96BY7 2078 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 KIF26AQ9ULI4 1882 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 E9PMD0 336 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 PODXLO00592 558 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 PRRG1O14668 218 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 LAMTOR5O43504 91 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 RHOP08100 348 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 POU2F2P09086 479 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 CD72P21854 359 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 GRM5P41594 1212 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 NPTX2P47972 431 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 TRAPPC10P48553 1259 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 HMGN5P82970 282 aaKnown RBP11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 ROR1Q01973 937 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 SOX4Q06945 474 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 DMP1Q13316 513 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 PDIA5Q14554 519 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 C3orf58Q8NDZ4 430 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 FBXO18Q8NFZ0 1043 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 ZNF461Q8TAF7 563 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 ACAP3Q96P50 834 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 ACO2Q99798 780 aaKnown RBP11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 CDT1Q9H211 546 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 TMEM134Q9H6X4 195 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 CYP4F11Q9HBI6 524 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 SLC38A7Q9NVC3 462 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 PPP4R2Q9NY27 417 aa11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 MTF2Q9Y483 593 aaPredicted RBP11.58□□□□□ -0.56
CHMP2A-202ENST00000596708 NUB1Q9Y5A7 615 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms