RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 DDX53Q86TM3 631 aaKnown RBP15.6■□□□□ 0.09
LIG1-208ENST00000595758 C12orf56Q8IXR9 622 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 XXYLT1Q8NBI6 393 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 C18orf25Q96B23 403 aaPredicted RBP15.6■□□□□ 0.09
LIG1-208ENST00000595758 DDX27Q96GQ7 796 aaKnown RBP15.6■□□□□ 0.09
LIG1-208ENST00000595758 UROC1Q96N76 676 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 ASB7Q9H672 318 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 RBAKQ9NYW8 714 aaPredicted RBP15.6■□□□□ 0.09
LIG1-208ENST00000595758 KIAA1468Q9P260 1216 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 CACNG4Q9UBN1 327 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 STXBP5LQ9Y2K9 1186 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 TRANK1O15050 2925 aa15.6■□□□□ 0.09
LIG1-208ENST00000595758 TDRD15B5MCY1 1934 aaKnown RBP15.59■□□□□ 0.09
LIG1-208ENST00000595758 ZNF233A6NK53 670 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 BIN1O00499 593 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 CALUO43852 315 aaPredicted RBP15.59■□□□□ 0.09
LIG1-208ENST00000595758 TADA2AO75478 443 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 CSPG5O95196 566 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 PRCPP42785 496 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 SOX4Q06945 474 aaPredicted RBP15.59■□□□□ 0.09
LIG1-208ENST00000595758 CAMK1Q14012 370 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 ZBTB6Q15916 424 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 JADE1Q6IE81 842 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 CBWD2Q8IUF1 395 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 BRSK2Q8IWQ3 736 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 GPT2Q8TD30 523 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 MICAL1Q8TDZ2 1067 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 FBXL18Q96ME1 805 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 PAAF1Q9BRP4 392 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 GOLGA2P5Q9HBQ8 144 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 TLR9Q9NR96 1032 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 MARCH5Q9NX47 278 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 STK39Q9UEW8 545 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 UBQLN1Q9UMX0 589 aaKnown RBP15.59■□□□□ 0.09
LIG1-208ENST00000595758 DERAQ9Y315 318 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.59■□□□□ 0.09
LIG1-208ENST00000595758 CITO14578 2027 aa15.59■□□□□ 0.09
LIG1-208ENST00000595758 PRRC2BQ5JSZ5 2229 aaKnown RBP15.59■□□□□ 0.09
LIG1-208ENST00000595758 TRIP11Q15643 1979 aa15.58■□□□□ 0.09
LIG1-208ENST00000595758 F8W810 466 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 XPOTO43592 962 aaKnown RBP15.58■□□□□ 0.08
LIG1-208ENST00000595758 EXOC3O60645 756 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 NR3C1P04150 777 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 NFICP08651 508 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 CYP3A5P20815 502 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 RPL9P32969 192 aaKnown RBP15.58■□□□□ 0.08
LIG1-208ENST00000595758 CLCNKBP51801 687 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 ERVFC1P60507 584 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 MORC3Q14149 939 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 TMEM132DQ14C87 1099 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 SNRNP35Q16560 246 aaKnown RBP15.58■□□□□ 0.08
LIG1-208ENST00000595758 UPP1Q16831 310 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 COBLL1Q53SF7 1204 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 PDE12Q6L8Q7 609 aaKnown RBP15.58■□□□□ 0.08
LIG1-208ENST00000595758 DCLRE1AQ6PJP8 1040 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 SLC9A9Q8IVB4 645 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 MICALL1Q8N3F8 863 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 RDH13Q8NBN7 331 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 TMEM174Q8WUU8 243 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 NUP62CLQ9H1M0 184 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 DMAC2Q9NW81 257 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 TUBGCP4Q9UGJ1 667 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 ADAM28Q9UKQ2 775 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 TRAF3IP3Q9Y228 551 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 C2CD2Q9Y426 696 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 MYO7AQ13402 2215 aa15.58■□□□□ 0.08
LIG1-208ENST00000595758 COL4A4P53420 1690 aaPredicted RBP15.57■□□□□ 0.08
LIG1-208ENST00000595758 PODXLO00592 558 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 B3GAT3O94766 335 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 KIF4AO95239 1232 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 MBD3O95983 291 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 MCM4P33991 863 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 IRS1P35568 1242 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 STIM1Q13586 685 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 MYBPC2Q14324 1141 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 BMS1Q14692 1282 aaKnown RBP15.57■□□□□ 0.08
LIG1-208ENST00000595758 TIGD5Q53EQ6 642 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 SPATA1Q5VX52 437 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 TMC7Q7Z402 723 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 ADSSL1Q8N142 457 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 VPS52Q8N1B4 723 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 BEST2Q8NFU1 509 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 TCF25Q9BQ70 676 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 VN1R3Q9BXE9 311 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 PDE11AQ9HCR9 933 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 NGRNQ9NPE2 291 aaKnown RBP15.57■□□□□ 0.08
LIG1-208ENST00000595758 ENTPD7Q9NQZ7 604 aa15.57■□□□□ 0.08
LIG1-208ENST00000595758 TMEM189-UBE2V1I3L0A0 370 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 FSCN2O14926 492 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 BMP6P22004 513 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 RPL13P26373 211 aaKnown RBP15.56■□□□□ 0.08
LIG1-208ENST00000595758 PPP1R2P41236 205 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 GUCY2FP51841 1108 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 WNT7BP56706 349 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 TFAMQ00059 246 aaKnown RBP15.56■□□□□ 0.08
LIG1-208ENST00000595758 SURF1Q15526 300 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 CCDC85BQ15834 202 aaPredicted RBP15.56■□□□□ 0.08
LIG1-208ENST00000595758 FUT10Q6P4F1 479 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 NT5DC4Q86YG4 428 aa15.56■□□□□ 0.08
LIG1-208ENST00000595758 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms