RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CHKAP35790 457 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 SNRPFP62306 86 aaKnown RBP17.62■□□□□ 0.41
LIG1-206ENST00000594067 CNGA2Q16280 664 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 EXOC3L1Q86VI1 746 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 MGARPQ8TDB4 240 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 KIFAP3Q92845 792 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 FSCN2O14926 492 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 TP73O15350 636 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 APBA3O96018 575 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 PSMC5P62195 406 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 LRRC14Q15048 493 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 CLEC16AQ2KHT3 1053 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 C2CD6Q53TS8 623 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 LLGL2Q6P1M3 1020 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 CRELD2Q6UXH1 353 aaPredicted RBP17.62■□□□□ 0.41
LIG1-206ENST00000594067 SV2AQ7L0J3 742 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 MCF2L2Q86YR7 1114 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 MAP4K3Q8IVH8 894 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 BSNDQ8WZ55 320 aa17.62■□□□□ 0.41
LIG1-206ENST00000594067 SNX3O60493 162 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 RPSAP08865 295 aaKnown RBP17.61■□□□□ 0.41
LIG1-206ENST00000594067 SLC39A4Q6P5W5 647 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 PNMA8AQ86V59 439 aaPredicted RBP17.61■□□□□ 0.41
LIG1-206ENST00000594067 FLAD1Q8NFF5 587 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 HERPUD2Q9BSE4 406 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 STMN4Q9H169 189 aaPredicted RBP17.61■□□□□ 0.41
LIG1-206ENST00000594067 EBF2Q9HAK2 575 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 KMT5AQ9NQR1 393 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 LOXHD1Q8IVV2 1947 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 CFAP73A6NFT4 308 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 CREB1P16220 341 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 DMP1Q13316 513 aaPredicted RBP17.61■□□□□ 0.41
LIG1-206ENST00000594067 ZNF268Q14587 947 aaPredicted RBP17.61■□□□□ 0.41
LIG1-206ENST00000594067 TAOK1Q7L7X3 1001 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 OGFOD1Q8N543 542 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 POMGNT1Q8WZA1 660 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 TIPINQ9BVW5 301 aa17.61■□□□□ 0.41
LIG1-206ENST00000594067 FOXO6A8MYZ6 492 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 RPS6P62753 249 aaKnown RBP17.6■□□□□ 0.41
LIG1-206ENST00000594067 CRYMQ14894 314 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 PGM5Q15124 567 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 DAB2IPQ5VWQ8 1189 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 TRMT10CQ7L0Y3 403 aaKnown RBP17.6■□□□□ 0.41
LIG1-206ENST00000594067 CPA5Q8WXQ8 436 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 STAMBPL1Q96FJ0 436 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 TESPA1A2RU30 521 aaPredicted RBP17.6■□□□□ 0.41
LIG1-206ENST00000594067 VPS41P49754 854 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 CYP24A1Q07973 514 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 ZNF568Q3ZCX4 644 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 MFSD5Q6N075 450 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 ANO5Q75V66 913 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 SUPT20HQ8NEM7 779 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 PWWP2AQ96N64 755 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 PLVAPQ9BX97 442 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 ROPN1BQ9BZX4 212 aaPredicted RBP17.6■□□□□ 0.41
LIG1-206ENST00000594067 ROPN1Q9HAT0 212 aaPredicted RBP17.6■□□□□ 0.41
LIG1-206ENST00000594067 WHRNQ9P202 907 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 CTNNAL1Q9UBT7 734 aa17.6■□□□□ 0.41
LIG1-206ENST00000594067 WDR64B1ANS9 1081 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 TBC1D12O60347 775 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 UBOX5O94941 541 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 OAS1P00973 400 aaKnown RBP17.59■□□□□ 0.41
LIG1-206ENST00000594067 ASNSP08243 561 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 CLNS1AP54105 237 aaKnown RBP17.59■□□□□ 0.41
LIG1-206ENST00000594067 LMBRD2Q68DH5 695 aaPredicted RBP17.59■□□□□ 0.41
LIG1-206ENST00000594067 DYDC1Q8WWB3 177 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 ARHGEF2Q92974 986 aaKnown RBP17.59■□□□□ 0.41
LIG1-206ENST00000594067 MFSD14AQ96MC6 490 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 NSRP1Q9H0G5 558 aaKnown RBP17.59■□□□□ 0.41
LIG1-206ENST00000594067 MLXIPLQ9NP71 852 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 L3MBTL1Q9Y468 752 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 CD2APQ9Y5K6 639 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 RRM1P23921 792 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 HMGB2P26583 209 aaKnown RBP17.59■□□□□ 0.41
LIG1-206ENST00000594067 ITGA8P53708 1063 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 RHBDF2Q6PJF5 856 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 MCOLN2Q8IZK6 566 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 TMC2Q8TDI7 906 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 GGT7Q9UJ14 662 aa17.59■□□□□ 0.41
LIG1-206ENST00000594067 MROH7Q68CQ1 1323 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 NCALDP61601 193 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 KCNJ2P63252 427 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 KYNUQ16719 465 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 GALNTL6Q49A17 601 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 SLC17A8Q8NDX2 589 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 SLCO2A1Q92959 643 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 SNF8Q96H20 258 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 GMLQ99445 158 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 FAM118BQ9BPY3 351 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 HEMGNQ9BXL5 484 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 ANKEF1Q9NU02 776 aa17.58■□□□□ 0.41
LIG1-206ENST00000594067 R3HDM2Q9Y2K5 976 aaKnown RBP17.58■□□□□ 0.41
LIG1-206ENST00000594067 UNGP13051 313 aaPredicted RBP17.58■□□□□ 0.4
LIG1-206ENST00000594067 ITIH2P19823 946 aa17.58■□□□□ 0.4
LIG1-206ENST00000594067 GBP2P32456 591 aaPredicted RBP17.58■□□□□ 0.4
LIG1-206ENST00000594067 JAK3P52333 1124 aa17.58■□□□□ 0.4
LIG1-206ENST00000594067 MCCD1P59942 119 aaPredicted RBP17.58■□□□□ 0.4
LIG1-206ENST00000594067 KIRREL3Q8IZU9 778 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms