RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 DDX27Q96GQ7 796 aaKnown RBP19.23■□□□□ 0.67
RETREG3-212ENST00000593251 SHDQ96IW2 340 aa19.23■□□□□ 0.67
RETREG3-212ENST00000593251 IFT74Q96LB3 600 aa19.23■□□□□ 0.67
RETREG3-212ENST00000593251 MTF2Q9Y483 593 aaPredicted RBP19.23■□□□□ 0.67
RETREG3-212ENST00000593251 KANSL1LA0AUZ9 987 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 TMEM189-UBE2V1I3L0A0 370 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 CD72P21854 359 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 CCT6AP40227 531 aaKnown RBP19.22■□□□□ 0.67
RETREG3-212ENST00000593251 OSTNP61366 133 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 SOX4Q06945 474 aaPredicted RBP19.22■□□□□ 0.67
RETREG3-212ENST00000593251 UBXN2BQ14CS0 331 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 UVSSAQ2YD98 709 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 SLC44A4Q53GD3 710 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 ERMP1Q7Z2K6 904 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 MAML2Q8IZL2 1156 aaPredicted RBP19.22■□□□□ 0.67
RETREG3-212ENST00000593251 C8orf76Q96K31 380 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 HINFPQ9BQA5 517 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 BHMT2Q9H2M3 363 aa19.22■□□□□ 0.67
RETREG3-212ENST00000593251 RBM25P49756 843 aaKnown RBP19.21■□□□□ 0.67
RETREG3-212ENST00000593251 EFNA5P52803 228 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 NBR1Q14596 966 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 UPP1Q16831 310 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 TTC38Q5R3I4 469 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 ZC3H14Q6PJT7 736 aaKnown RBP19.21■□□□□ 0.67
RETREG3-212ENST00000593251 CCDC83Q8IWF9 413 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 DCLK2Q8N568 766 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 RMDN1Q96DB5 314 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 MCRS1Q96EZ8 462 aa19.21■□□□□ 0.67
RETREG3-212ENST00000593251 DDX23Q9BUQ8 820 aaKnown RBP19.21■□□□□ 0.67
RETREG3-212ENST00000593251 MRPS23Q9Y3D9 190 aaKnown RBP19.21■□□□□ 0.67
RETREG3-212ENST00000593251 SMIM28A0A1B0GU29 152 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 K7ERI5 159 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 SLC5A9Q2M3M2 681 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 HAUS3Q68CZ6 603 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 POTEHQ6S545 545 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 KIFAP3Q92845 792 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 UROC1Q96N76 676 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 PLA2G2FQ9BZM2 168 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 SPATA6Q9NWH7 488 aaPredicted RBP19.2■□□□□ 0.66
RETREG3-212ENST00000593251 KIAA1024Q9UPX6 916 aa19.2■□□□□ 0.66
RETREG3-212ENST00000593251 FAM170BA6NMN3 283 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 CCDC169A6NNP5 214 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 RHOP08100 348 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 POU2F2P09086 479 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 PRKCQQ04759 706 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 ANKS3Q6ZW76 656 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 BCO2Q9BYV7 579 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 CDT1Q9H211 546 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 FOXP1Q9H334 677 aaPredicted RBP19.19■□□□□ 0.66
RETREG3-212ENST00000593251 DDX19AQ9NUU7 478 aaKnown RBP19.19■□□□□ 0.66
RETREG3-212ENST00000593251 LRWD1Q9UFC0 647 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 KCNH3Q9ULD8 1083 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 TNFSF13BQ9Y275 285 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 BACE2Q9Y5Z0 518 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 OTOGLQ3ZCN5 2332 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 TICRRQ7Z2Z1 1910 aa19.19■□□□□ 0.66
RETREG3-212ENST00000593251 TRAPPC3O43617 180 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 CEBPBP17676 345 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 MUTP22033 750 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 GRM5P41594 1212 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 YARSP54577 528 aaKnown RBP19.18■□□□□ 0.66
RETREG3-212ENST00000593251 ARPP19P56211 112 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 PEX3P56589 373 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 ROR1Q01973 937 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 ORC2Q13416 577 aaPredicted RBP19.18■□□□□ 0.66
RETREG3-212ENST00000593251 ZNF568Q3ZCX4 644 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 C4orf32Q8N8J7 132 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 ZMAT2Q96NC0 199 aaKnown RBP19.18■□□□□ 0.66
RETREG3-212ENST00000593251 ACO2Q99798 780 aaKnown RBP19.18■□□□□ 0.66
RETREG3-212ENST00000593251 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
RETREG3-212ENST00000593251 LTB4R2Q9NPC1 389 aa19.18■□□□□ 0.66
RETREG3-212ENST00000593251 WDR27A2RRH5 827 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 E9PMD0 336 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 PODXLO00592 558 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 LAMTOR5O43504 91 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 LRG1P02750 347 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 NPTX2P47972 431 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 FXR2P51116 673 aaKnown RBP eCLIP19.17■□□□□ 0.66
RETREG3-212ENST00000593251 PFKPQ01813 784 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 GNL2Q13823 731 aaKnown RBP19.17■□□□□ 0.66
RETREG3-212ENST00000593251 VARS2Q5ST30 1063 aaKnown RBP19.17■□□□□ 0.66
RETREG3-212ENST00000593251 ALKAL1Q6UXT8 129 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 TPRG1Q6ZUI0 275 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 TAS1R3Q7RTX0 852 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 APBB1IPQ7Z5R6 666 aaPredicted RBP19.17■□□□□ 0.66
RETREG3-212ENST00000593251 SNX29Q8TEQ0 813 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 RUBCNQ92622 972 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 TARS2Q9BW92 718 aaKnown RBP19.17■□□□□ 0.66
RETREG3-212ENST00000593251 PHLPP2Q6ZVD8 1323 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 CACNA1AO00555 2505 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 DNAH14Q0VDD8 3507 aa19.17■□□□□ 0.66
RETREG3-212ENST00000593251 PP2D1A8MPX8 630 aa19.16■□□□□ 0.66
RETREG3-212ENST00000593251 PRRG1O14668 218 aa19.16■□□□□ 0.66
RETREG3-212ENST00000593251 KINO60870 393 aaKnown RBP19.16■□□□□ 0.66
RETREG3-212ENST00000593251 HIP1RO75146 1068 aa19.16■□□□□ 0.66
RETREG3-212ENST00000593251 ECI2O75521 394 aa19.16■□□□□ 0.66
RETREG3-212ENST00000593251 SEC24BO95487 1268 aa19.16■□□□□ 0.66
RETREG3-212ENST00000593251 HARSP12081 509 aaKnown RBP19.16■□□□□ 0.66
RETREG3-212ENST00000593251 PTPN2P17706 415 aa19.16■□□□□ 0.66
RETREG3-212ENST00000593251 TARSP26639 723 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms