RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 HSP90AA2PQ14568 343 aaPredicted RBP18.75■□□□□ 0.59
AP3D1-211ENST00000591650 NAB2Q15742 525 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 LRIT3Q3SXY7 679 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 CMTR2Q8IYT2 770 aaKnown RBP18.75■□□□□ 0.59
AP3D1-211ENST00000591650 C18orf25Q96B23 403 aaPredicted RBP18.75■□□□□ 0.59
AP3D1-211ENST00000591650 KIF12Q96FN5 646 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 CNOT6LQ96LI5 555 aaKnown RBP18.75■□□□□ 0.59
AP3D1-211ENST00000591650 CGRRF1Q99675 332 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 MRPL9Q9BYD2 267 aaKnown RBP18.75■□□□□ 0.59
AP3D1-211ENST00000591650 CBX8Q9HC52 389 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 SAMSN1Q9NSI8 373 aaKnown RBP18.75■□□□□ 0.59
AP3D1-211ENST00000591650 CACNG4Q9UBN1 327 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 TUBGCP4Q9UGJ1 667 aa18.75■□□□□ 0.59
AP3D1-211ENST00000591650 LRRIQ3A6PVS8 624 aaPredicted RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 ARHGEF15O94989 841 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 DLATP10515 647 aaKnown RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 GUCY2FP51841 1108 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 DLG4P78352 724 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 BFSP1Q12934 665 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 BTG3Q14201 252 aaPredicted RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 TMEM132DQ14C87 1099 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 IQCB1Q15051 598 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 CCDC40Q4G0X9 1142 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 C1orf220Q5T0J3 134 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 FILIP1Q7Z7B0 1213 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 SP7Q8TDD2 431 aaPredicted RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 PARD3BQ8TEW8 1205 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 POP1Q99575 1024 aaKnown RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 RAD9AQ99638 391 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 HSD3B7Q9H2F3 369 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 THAP9Q9H5L6 903 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 ASB7Q9H672 318 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 GOLGA2P5Q9HBQ8 144 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 INSL6Q9Y581 213 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 MRPL42Q9Y6G3 142 aaKnown RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 SOX1O00570 391 aaPredicted RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 IKBKBO14920 756 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 DSC1Q08554 894 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 CDKAL1Q5VV42 579 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 INTS8Q75QN2 995 aaKnown RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 CD302Q8IX05 232 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 OR5B17Q8NGF7 314 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 PBX4Q9BYU1 374 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 MTMR12Q9C0I1 747 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 FANCLQ9NW38 375 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 ARMCX3Q9UH62 379 aaPredicted RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 YBX2Q9Y2T7 364 aaKnown RBP18.74■□□□□ 0.59
AP3D1-211ENST00000591650 C2CD2Q9Y426 696 aa18.74■□□□□ 0.59
AP3D1-211ENST00000591650 SCN1AP35498 2009 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 DDHD2O94830 711 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 FGFR1OPO95684 399 aaKnown RBP18.73■□□□□ 0.59
AP3D1-211ENST00000591650 THP07101 528 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 KRT13P13646 458 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 VAMP7P51809 220 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 TFAMQ00059 246 aaKnown RBP18.73■□□□□ 0.59
AP3D1-211ENST00000591650 RNASELQ05823 741 aaKnown RBP18.73■□□□□ 0.59
AP3D1-211ENST00000591650 DCAF17Q5H9S7 520 aaPredicted RBP18.73■□□□□ 0.59
AP3D1-211ENST00000591650 FRMD5Q7Z6J6 570 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 LUZP1Q86V48 1076 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 FAM200AQ8TCP9 573 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 TMC2Q8TDI7 906 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 RSPH1Q8WYR4 309 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 FNBP1Q96RU3 617 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 CWH43Q9H720 699 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 DNAJB4Q9UDY4 337 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 DERAQ9Y315 318 aa18.73■□□□□ 0.59
AP3D1-211ENST00000591650 CHD7Q9P2D1 2997 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 COL4A4P53420 1690 aaPredicted RBP18.72■□□□□ 0.59
AP3D1-211ENST00000591650 PLXNA4Q9HCM2 1894 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 CASTOR2A6NHX0 329 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 ZC3H11AO75152 810 aaKnown RBP eCLIP18.72■□□□□ 0.59
AP3D1-211ENST00000591650 CAVIN2O95810 425 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 GNA14O95837 355 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 CA3P07451 260 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 LINC00271P0C7V0 271 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 PBX3P40426 434 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 MARSP56192 900 aaKnown RBP18.72■□□□□ 0.59
AP3D1-211ENST00000591650 TUSC3Q13454 348 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 SURF1Q15526 300 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 ZBTB6Q15916 424 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 HABP4Q5JVS0 413 aaKnown RBP18.72■□□□□ 0.59
AP3D1-211ENST00000591650 SPRED2Q7Z698 418 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 TRIM59Q8IWR1 403 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 SLC35C1Q96A29 364 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 PAAF1Q9BRP4 392 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 NRDE2Q9H7Z3 1164 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 INTS13Q9NVM9 706 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 KANSL3Q9P2N6 904 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 UBQLN1Q9UMX0 589 aaKnown RBP18.72■□□□□ 0.59
AP3D1-211ENST00000591650 PCDHA11Q9Y5I1 949 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 TSC2P49815 1807 aa18.72■□□□□ 0.59
AP3D1-211ENST00000591650 KCNJ18B7U540 433 aa18.71■□□□□ 0.59
AP3D1-211ENST00000591650 TNNI1P19237 187 aa18.71■□□□□ 0.59
AP3D1-211ENST00000591650 CLDN10P78369 228 aa18.71■□□□□ 0.59
AP3D1-211ENST00000591650 SMAD3P84022 425 aaKnown RBP18.71■□□□□ 0.59
AP3D1-211ENST00000591650 KCNJ12Q14500 433 aa18.71■□□□□ 0.59
AP3D1-211ENST00000591650 TCERG1LQ5VWI1 586 aa18.71■□□□□ 0.59
AP3D1-211ENST00000591650 SCARA3Q6AZY7 606 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms