RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 CCDC40Q4G0X9 1142 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 C18orf25Q96B23 403 aaPredicted RBP16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 CGRRF1Q99675 332 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 CWH43Q9H720 699 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 NRDE2Q9H7Z3 1164 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 C2CD2Q9Y426 696 aa16.77■□□□□ 0.28
RPRD1A-208ENST00000589050 XPOTO43592 962 aaKnown RBP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 B4GALT3O60512 393 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 ZC3H11AO75152 810 aaKnown RBP eCLIP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 GNA14O95837 355 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 ZNF165P49910 485 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 VAMP7P51809 220 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 TFAMQ00059 246 aaKnown RBP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 MYL5Q02045 173 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 TUSC3Q13454 348 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 NAB2Q15742 525 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 LMBRD2Q68DH5 695 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 LRSAM1Q6UWE0 723 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 EFCAB13Q8IY85 973 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 AOPEPQ8N6M6 819 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 PLEKHO2Q8TD55 490 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 POP1Q99575 1024 aaKnown RBP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 NKX2-4Q9H2Z4 354 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 TSPY26PQ9H489 355 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 THAP9Q9H5L6 903 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 DNAJB4Q9UDY4 337 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 TUBGCP4Q9UGJ1 667 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 ARMCX3Q9UH62 379 aaPredicted RBP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 UBQLN1Q9UMX0 589 aaKnown RBP16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 NFE2L3Q9Y4A8 694 aa16.76■□□□□ 0.27
RPRD1A-208ENST00000589050 LINC01553A4QN01 128 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 CASTOR2A6NHX0 329 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 LRRIQ3A6PVS8 624 aaPredicted RBP16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 ARHGEF15O94989 841 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 TMEM191BP0C7N4 346 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 LAG3P18627 525 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 TNNI1P19237 187 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 DNAJB2P25686 324 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 DLG4P78352 724 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 SOX4Q06945 474 aaPredicted RBP16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 DSC1Q08554 894 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 BFSP1Q12934 665 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 ZBTB6Q15916 424 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 FRMD5Q7Z6J6 570 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 USP37Q86T82 979 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 WDR49Q8IV35 697 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 COLGALT2Q8IYK4 626 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 BEST2Q8NFU1 509 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 CACTINQ8WUQ7 758 aaKnown RBP16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 FAM84AQ96KN4 292 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 GOLGA2P5Q9HBQ8 144 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 METTL14Q9HCE5 456 aaKnown RBP16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 PDE4DIPQ5VU43 2346 aa16.75■□□□□ 0.27
RPRD1A-208ENST00000589050 PTPRJQ12913 1337 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 CAVIN2O95810 425 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 TRIM49P0CI25 452 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 TRIM49CP0CI26 452 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 CYP3A5P20815 502 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 OR1G1P47890 313 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 GUCY2FP51841 1108 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 BCAR1P56945 870 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 ZNF445P59923 1031 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 DCAF17Q5H9S7 520 aaPredicted RBP16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 PPP2R2DQ66LE6 453 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 FAM114A1Q8IWE2 563 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 TMEM130Q8N3G9 435 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 OR5B17Q8NGF7 314 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 CLP1Q92989 425 aaKnown RBP16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 TIFAQ96CG3 184 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 ANKRD36BP1Q96IX9 119 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 CNOT6LQ96LI5 555 aaKnown RBP16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 ZNF558Q96NG5 402 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 TMEM175Q9BSA9 504 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 MTMR12Q9C0I1 747 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 AAASQ9NRG9 546 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 INTS13Q9NVM9 706 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 CACNG4Q9UBN1 327 aa16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.74■□□□□ 0.27
RPRD1A-208ENST00000589050 CEP290O15078 2479 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 SMTNL1A8MU46 457 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 IKBKBO14920 756 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 TNNC2P02585 160 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 LINC00271P0C7V0 271 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 PBX3P40426 434 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 SLC11A1P49279 550 aa16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 ALDH7A1P49419 539 aaKnown RBP16.73■□□□□ 0.27
RPRD1A-208ENST00000589050 CLDN10P78369 228 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms