RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 MICAL1Q8TDZ2 1067 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 POF1BQ8WVV4 589 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 ERCC4Q92889 916 aaPredicted RBP12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 DDX27Q96GQ7 796 aaKnown RBP12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 IGSF21Q96ID5 467 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 IKZF4Q9H2S9 585 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 DERAQ9Y315 318 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 PLXNA4Q9HCM2 1894 aa12.9□□□□□ -0.34
SDHDP1-201ENST00000588055 TRANK1O15050 2925 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 CLIC2O15247 247 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 GRM6O15303 877 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 TADA2AO75478 443 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 SURF1Q15526 300 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 SNRNP35Q16560 246 aaKnown RBP12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 XKR4Q5GH76 650 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 ALKAL1Q6UXT8 129 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 USP37Q86T82 979 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 NT5DC4Q86YG4 428 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 C12orf56Q8IXR9 622 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 FNBP1Q96RU3 617 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 TCF25Q9BQ70 676 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 MIOSQ9NXC5 875 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 MAN1B1Q9UKM7 699 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 ADAM28Q9UKQ2 775 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 FRMD4BQ9Y2L6 1034 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 C2CD2Q9Y426 696 aa12.89□□□□□ -0.35
SDHDP1-201ENST00000588055 LACTBL1A8MY62 500 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 BIN1O00499 593 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 PODXLO00592 558 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 B4GALT3O60512 393 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 B3GAT3O94766 335 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 NR3C1P04150 777 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 URODP06132 367 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 TMEM191BP0C7N4 346 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 CYP3A5P20815 502 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 NR2F2P24468 414 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 HOXD13P35453 343 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 SMC1AQ14683 1233 aaKnown RBP12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 JADE1Q6IE81 842 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 KIAA1841Q6NSI8 718 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 DDX53Q86TM3 631 aaKnown RBP12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 CACTINQ8WUQ7 758 aaKnown RBP12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 KCTD10Q9H3F6 313 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 NSUN3Q9H649 340 aaKnown RBP12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 KIAA1468Q9P260 1216 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 TUBGCP4Q9UGJ1 667 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 SSX2IPQ9Y2D8 614 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 NUB1Q9Y5A7 615 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 TRIP11Q15643 1979 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 MYO9BQ13459 2157 aa12.88□□□□□ -0.35
SDHDP1-201ENST00000588055 BICDL2A1A5D9 508 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 TMEM189-UBE2V1I3L0A0 370 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 KIF4AO95239 1232 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 NFICP08651 508 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 POU3F3P20264 500 aaPredicted RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 PRCPP42785 496 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 CLCNKBP51801 687 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 TFAMQ00059 246 aaKnown RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 LRRC63Q05C16 580 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 SPAG1Q07617 926 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 ADGRE1Q14246 886 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 SKIV2LQ15477 1246 aaKnown RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 EDRF1Q3B7T1 1238 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 PLPP4Q5VZY2 271 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 FUT10Q6P4F1 479 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 TMEM173Q86WV6 379 aaPredicted RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 CBWD2Q8IUF1 395 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 SLC9A9Q8IVB4 645 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 MAFAQ8NHW3 353 aaPredicted RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 C18orf25Q96B23 403 aaPredicted RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 ZMAT2Q96NC0 199 aaKnown RBP12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 GOLGA2P5Q9HBQ8 144 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 MARCH5Q9NX47 278 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 MTCH2Q9Y6C9 303 aa12.87□□□□□ -0.35
SDHDP1-201ENST00000588055 ANK1P16157 1881 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms