RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 TATDN2Q93075 761 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 CCDC102AQ96A19 550 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 ZBTB45Q96K62 511 aaPredicted RBP12.1□□□□□ -0.47
LIG3-204ENST00000585740 PSMB7Q99436 277 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 NAP1L3Q99457 506 aaPredicted RBP12.1□□□□□ -0.47
LIG3-204ENST00000585740 IMPG2Q9BZV3 1241 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 THAP2Q9H0W7 228 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 PRMT7Q9NVM4 692 aaPredicted RBP12.1□□□□□ -0.47
LIG3-204ENST00000585740 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.1□□□□□ -0.47
LIG3-204ENST00000585740 ANKFY1Q9P2R3 1169 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 UVRAGQ9P2Y5 699 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 CNTNAP2Q9UHC6 1331 aa12.1□□□□□ -0.47
LIG3-204ENST00000585740 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 CLSTN1O94985 981 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 LGALS2P05162 132 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 SRGAP2CP0DJJ0 459 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 MYBL1P10243 752 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 KRT5P13647 590 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 CHRNB2P17787 502 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 TMOD1P28289 359 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 PHKA2P46019 1235 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 ZNF157P51786 506 aaPredicted RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 PTENP60484 403 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 FMO1Q01740 532 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 GABPB1Q06547 395 aaPredicted RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 KYAT1Q16773 422 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 TDRD10Q5VZ19 366 aaKnown RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 EFCAB12Q6NXP0 572 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 CCNI2Q6ZMN8 369 aaPredicted RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 TSHZ1Q6ZSZ6 1077 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 IFNLR1Q8IU57 520 aaPredicted RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 RASGEF1CQ8N431 466 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 COPS5Q92905 334 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 RPS6KC1Q96S38 1066 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIG3-204ENST00000585740 TCHPQ9BT92 498 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 HAPLN2Q9GZV7 340 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 FZD8Q9H461 694 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 ZCCHC17Q9NP64 241 aaKnown RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 PDGFCQ9NRA1 345 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 TAS2R14Q9NYV8 317 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 STIM2Q9P246 746 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 GTF3C4Q9UKN8 822 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 TTC7AQ9ULT0 858 aaPredicted RBP12.09□□□□□ -0.47
LIG3-204ENST00000585740 PCDHB2Q9Y5E7 798 aa12.09□□□□□ -0.47
LIG3-204ENST00000585740 ANK1P16157 1881 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CEP104O60308 925 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 PPFIA4O75335 1185 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 IL18RAPO95256 599 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 C22orf31O95567 290 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CYP1A2P05177 515 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 MMEP08473 750 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CLTAP09496 248 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 PROZP22891 400 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 PLA2G4AP47712 749 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 YWHAEP62258 255 aaKnown RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 DRP2Q13474 957 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CUL2Q13617 745 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CLEC16AQ2KHT3 1053 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 IQSEC1Q6DN90 963 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 ACAD10Q6JQN1 1059 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 GPR142Q7Z601 462 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 SLC47A2Q86VL8 602 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 RHPN2Q8IUC4 686 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 UBL4BQ8N7F7 174 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 ARHGEF26Q96DR7 871 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 FAXDC2Q96IV6 333 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 MS4A14Q96JA4 679 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CARD9Q9H257 536 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 ABHD16BQ9H3Z7 469 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 RBM12Q9NTZ6 932 aaKnown RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 RNF216Q9NWF9 866 aaPredicted RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 TMEM59LQ9UK28 342 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 PACSIN2Q9UNF0 486 aaPredicted RBP12.08□□□□□ -0.48
LIG3-204ENST00000585740 TNFSF13BQ9Y275 285 aa12.08□□□□□ -0.48
LIG3-204ENST00000585740 SASH3O75995 380 aa12.07□□□□□ -0.48
LIG3-204ENST00000585740 VNN1O95497 513 aa12.07□□□□□ -0.48
LIG3-204ENST00000585740 TNNC2P02585 160 aa12.07□□□□□ -0.48
LIG3-204ENST00000585740 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms