RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 IGFBP6P24592 240 aaPredicted RBP11.02□□□□□ -0.65
RFFL-212ENST00000584655 NRLP54845 237 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 MEA1Q16626 185 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ZNF699Q32M78 642 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ATF7IP2Q5U623 682 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 SNTG2Q9NY99 539 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 MCM3APO60318 1980 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 VCANP13611 3396 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 MAPK4P31152 587 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 BCAR1P56945 870 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 TNFAIP2Q03169 654 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ANKRD7Q92527 254 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 STK33Q9BYT3 514 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ATP8A1Q9Y2Q0 1164 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 ALG6Q9Y672 507 aa11.02□□□□□ -0.65
RFFL-212ENST00000584655 A0A0G2JLL6 359 aaPredicted RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 FRMD3A2A2Y4 597 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 MAPTP10636 758 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 ADORA2BP29275 332 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 POLR2BP30876 1174 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 BSPRYQ5W0U4 402 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 PRRT2Q7Z6L0 340 aaPredicted RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 GPR161Q8N6U8 529 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 ADAM22Q9P0K1 906 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 MYPNQ86TC9 1320 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 CITO14578 2027 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 RAD51CO43502 376 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 CNMDO75829 334 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 CYP11B1P15538 503 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 TCF4P15884 667 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 SMPD1P17405 629 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 ATN1P54259 1190 aaPredicted RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 CASP8Q14790 479 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 CELF3Q5SZQ8 465 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 C1orf220Q5T0J3 134 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 CST9Q5W186 159 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 MAGOHBQ96A72 148 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 C18orf25Q96B23 403 aaPredicted RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 MPHOSPH6Q99547 160 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 APOBEC3GQ9HC16 384 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 SEL1LQ9UBV2 794 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 HMGXB4Q9UGU5 601 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 MEIS3P2A8K0S8 358 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 H3BQF6 201 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 GPR25O00155 361 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 PPEF2O14830 753 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 ARPP19P56211 112 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 RBBP8NLQ8NC74 664 aaPredicted RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 OR6B3Q8NGW1 331 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 RPF1Q9H9Y2 349 aaKnown RBP11.01□□□□□ -0.65
RFFL-212ENST00000584655 LAMB1P07942 1786 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 WDR87Q6ZQQ6 2873 aa11.01□□□□□ -0.65
RFFL-212ENST00000584655 EYSQ5T1H1 3165 aa11□□□□□ -0.65
RFFL-212ENST00000584655 CYP2C9P11712 490 aa11□□□□□ -0.65
RFFL-212ENST00000584655 RPL7AP62424 266 aaKnown RBP11□□□□□ -0.65
RFFL-212ENST00000584655 CACNB2Q08289 660 aaPredicted RBP11□□□□□ -0.65
RFFL-212ENST00000584655 PPP1R7Q15435 360 aa11□□□□□ -0.65
RFFL-212ENST00000584655 TRAPPC11Q7Z392 1133 aa11□□□□□ -0.65
RFFL-212ENST00000584655 CREG2Q8IUH2 290 aa11□□□□□ -0.65
RFFL-212ENST00000584655 ZNF564Q8TBZ8 553 aaPredicted RBP11□□□□□ -0.65
RFFL-212ENST00000584655 ALG3Q92685 438 aa11□□□□□ -0.65
RFFL-212ENST00000584655 FAM149B1Q96BN6 582 aa11□□□□□ -0.65
RFFL-212ENST00000584655 TSGA10Q9BZW7 698 aa11□□□□□ -0.65
RFFL-212ENST00000584655 ASIC3Q9UHC3 531 aa11□□□□□ -0.65
RFFL-212ENST00000584655 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
RFFL-212ENST00000584655 SCAMP3O14828 347 aaKnown RBP11□□□□□ -0.65
RFFL-212ENST00000584655 TREHO43280 583 aa11□□□□□ -0.65
RFFL-212ENST00000584655 CETPP11597 493 aa11□□□□□ -0.65
RFFL-212ENST00000584655 SCP2P22307 547 aa11□□□□□ -0.65
RFFL-212ENST00000584655 PSMC1P62191 440 aaKnown RBP11□□□□□ -0.65
RFFL-212ENST00000584655 USP50Q70EL3 339 aaPredicted RBP11□□□□□ -0.65
RFFL-212ENST00000584655 MGARPQ8TDB4 240 aa11□□□□□ -0.65
RFFL-212ENST00000584655 HSPH1Q92598 858 aa11□□□□□ -0.65
RFFL-212ENST00000584655 C18orf8Q96DM3 657 aa11□□□□□ -0.65
RFFL-212ENST00000584655 SMYD3Q9H7B4 428 aa11□□□□□ -0.65
RFFL-212ENST00000584655 ANKEF1Q9NU02 776 aa11□□□□□ -0.65
RFFL-212ENST00000584655 GPATCH2LQ9NWQ4 482 aa11□□□□□ -0.65
RFFL-212ENST00000584655 TBK1Q9UHD2 729 aa11□□□□□ -0.65
RFFL-212ENST00000584655 TTLL3Q9Y4R7 772 aa11□□□□□ -0.65
RFFL-212ENST00000584655 SSC5DA1L4H1 1573 aa11□□□□□ -0.65
RFFL-212ENST00000584655 EIF3DO15371 548 aaKnown RBP eCLIP11□□□□□ -0.65
RFFL-212ENST00000584655 GTF2BQ00403 316 aa11□□□□□ -0.65
RFFL-212ENST00000584655 IFFO1Q0D2I5 559 aa11□□□□□ -0.65
RFFL-212ENST00000584655 CCDC38Q502W7 563 aa11□□□□□ -0.65
RFFL-212ENST00000584655 GPAT2Q6NUI2 795 aa11□□□□□ -0.65
RFFL-212ENST00000584655 PNMA8AQ86V59 439 aaPredicted RBP11□□□□□ -0.65
RFFL-212ENST00000584655 TPCN2Q8NHX9 752 aa11□□□□□ -0.65
RFFL-212ENST00000584655 GOLGA5Q8TBA6 731 aa11□□□□□ -0.65
RFFL-212ENST00000584655 PNMA3Q9UL41 463 aa11□□□□□ -0.65
RFFL-212ENST00000584655 MYO1FO00160 1098 aa11□□□□□ -0.65
RFFL-212ENST00000584655 AFF1P51825 1210 aaKnown RBP11□□□□□ -0.65
RFFL-212ENST00000584655 ACVR2BQ13705 512 aa11□□□□□ -0.65
RFFL-212ENST00000584655 NAB2Q15742 525 aa11□□□□□ -0.65
RFFL-212ENST00000584655 WHAMMP3Q1A5X7 153 aa11□□□□□ -0.65
RFFL-212ENST00000584655 DENND2CQ68D51 928 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms