RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 CLDN3O15551 220 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 CALUO43852 315 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 GARTP22102 1010 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 SCNN1GP51170 649 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 STX17P56962 302 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 PLCB3Q01970 1234 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 LRRC63Q05C16 580 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 DSC1Q08554 894 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 GRIK3Q13003 919 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 NFIL3Q16649 462 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 ANKRD40Q6AI12 368 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 TTI2Q6NXR4 508 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 FOXR2Q6PJQ5 311 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 C12orf56Q8IXR9 622 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 SLC39A11Q8N1S5 342 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 GSTCDQ8NEC7 633 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 TMEM174Q8WUU8 243 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 POMGNT1Q8WZA1 660 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 FAM193BQ96PV7 902 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 MED15Q96RN5 788 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 TMEM175Q9BSA9 504 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 NRDE2Q9H7Z3 1164 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 ALG13Q9NP73 1137 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 MYO7AQ13402 2215 aa17.39■□□□□ 0.37
CSNK1D-223ENST00000584472 A0A0B4J269 797 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 BICDL2A1A5D9 508 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 B4GALT3O60512 393 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 POMCP01189 267 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 KYAT1Q16773 422 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 CTC1Q2NKJ3 1217 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 EDRF1Q3B7T1 1238 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 ARMCX5Q6P1M9 558 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 ZBTB33Q86T24 672 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 ZNF280BQ86YH2 543 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 PPP2R3CQ969Q6 453 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 TSG101Q99816 390 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 KLK14Q9P0G3 267 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 DNAJB4Q9UDY4 337 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 ATG2AQ2TAZ0 1938 aa17.38■□□□□ 0.37
CSNK1D-223ENST00000584472 CITO14578 2027 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 DDHD2O94830 711 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 NR3C1P04150 777 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 GALTP07902 379 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 PBX3P40426 434 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 YARSP54577 528 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 KRT17Q04695 432 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 MYBPC2Q14324 1141 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 TCEAL5Q5H9L2 206 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 SLC9A9Q8IVB4 645 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 COLGALT2Q8IYK4 626 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 POF1BQ8WVV4 589 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 DUSP9Q99956 384 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 BPIFA3Q9BQP9 254 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 PCIF1Q9H4Z3 704 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 DMAC2Q9NW81 257 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 HSPBP1Q9NZL4 362 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 STK39Q9UEW8 545 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 AGO2Q9UKV8 859 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 FAM50BQ9Y247 325 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 ANK1P16157 1881 aa17.37■□□□□ 0.37
CSNK1D-223ENST00000584472 PTGESO14684 152 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 KIAA0391O15091 583 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 OGTO15294 1046 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 FAM189A1O60320 539 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 HARSP12081 509 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 NR2F2P24468 414 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 DNAJB1P25685 340 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 SLC11A1P49279 550 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 FKBP3Q00688 224 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 CAMK1Q14012 370 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 XKR4Q5GH76 650 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 ZC3H3Q8IXZ2 948 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 CEP120Q8N960 986 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 TMEM169Q96HH4 297 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 IGSF21Q96ID5 467 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 ACAP3Q96P50 834 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 MSTO1Q9BUK6 570 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 TLR9Q9NR96 1032 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 MIOSQ9NXC5 875 aa17.36■□□□□ 0.37
CSNK1D-223ENST00000584472 TRIP11Q15643 1979 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 LDHAP00338 332 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 ALDH2P05091 517 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 THP07101 528 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 CLTAP09496 248 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 KCNA5P22460 613 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 RPL13P26373 211 aaKnown RBP17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 ZNF165P49910 485 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 CYP2J2P51589 502 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 ADAM9Q13443 819 aa17.35■□□□□ 0.37
CSNK1D-223ENST00000584472 TUSC3Q13454 348 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms