RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LUZP1Q86V48 1076 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 TMEM192Q8IY95 271 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 HELQQ8TDG4 1101 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
SKA2-205ENST00000580541 BORCS6Q96GS4 357 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 RAD9AQ99638 391 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 SAMSN1Q9NSI8 373 aaKnown RBP15.47■□□□□ 0.07
SKA2-205ENST00000580541 INPP5FQ9Y2H2 1132 aa15.47■□□□□ 0.07
SKA2-205ENST00000580541 CEP290O15078 2479 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 TBKBP1A7MCY6 615 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 FGFR1P11362 822 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 PAX3P23760 479 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 RPL9P32969 192 aaKnown RBP15.46■□□□□ 0.07
SKA2-205ENST00000580541 CLDN10P78369 228 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 DEFB103AP81534 67 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 TFAMQ00059 246 aaKnown RBP15.46■□□□□ 0.07
SKA2-205ENST00000580541 NCAPHQ15003 741 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 SHHQ15465 462 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 MAN2A1Q16706 1144 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 DCAF17Q5H9S7 520 aaPredicted RBP15.46■□□□□ 0.07
SKA2-205ENST00000580541 CDKAL1Q5VV42 579 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 HERC6Q8IVU3 1022 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 CMTR2Q8IYT2 770 aaKnown RBP15.46■□□□□ 0.07
SKA2-205ENST00000580541 LRRC43Q8N309 656 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 ZSWIM2Q8NEG5 633 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 UROC1Q96N76 676 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 CGRRF1Q99675 332 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 TUBGCP2Q9BSJ2 902 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 INTS13Q9NVM9 706 aa15.46■□□□□ 0.07
SKA2-205ENST00000580541 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.45■□□□□ 0.06
SKA2-205ENST00000580541 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.45■□□□□ 0.06
SKA2-205ENST00000580541 LRRC10BA6NIK2 292 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 P4HA2O15460 535 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 TLL1O43897 1013 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 PHACTR2O75167 634 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 ALDH2P05091 517 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 TPM3P06753 285 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 BTG3Q14201 252 aaPredicted RBP15.45■□□□□ 0.06
SKA2-205ENST00000580541 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 CLLU1OSQ5K130 101 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 JADE1Q6IE81 842 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 IRF2BP1Q8IU81 584 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 CCDC150Q8NCX0 1101 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 ZFP42Q96MM3 310 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 AAASQ9NRG9 546 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 CXXC1Q9P0U4 656 aaPredicted RBP15.45■□□□□ 0.06
SKA2-205ENST00000580541 TRIP11Q15643 1979 aa15.45■□□□□ 0.06
SKA2-205ENST00000580541 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 PES1O00541 588 aaKnown RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 PMM2O15305 246 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 SERPINC1P01008 464 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 POMCP01189 267 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 AFPP02771 609 aaKnown RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 ZNF18P17022 549 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 ALDH7A1P49419 539 aaKnown RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 SCNN1GP51170 649 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 HTRA4P83105 476 aaPredicted RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 KCNH2Q12809 1159 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 TUSC3Q13454 348 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 TRPC3Q13507 836 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 ZBTB6Q15916 424 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 FKBP15Q5T1M5 1219 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 SPOUT1Q5T280 376 aaKnown RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 KRT39Q6A163 491 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 FAM117BQ6P1L5 589 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 TDHQ8IZJ6 230 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 RNF214Q8ND24 703 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 ZNF689Q96CS4 500 aaPredicted RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 PPP1R10Q96QC0 940 aaKnown RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 TMEM175Q9BSA9 504 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 TMEM8AQ9HCN3 771 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 DPP3Q9NY33 737 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 LIMA1Q9UHB6 759 aaKnown RBP15.44■□□□□ 0.06
SKA2-205ENST00000580541 ITGA11Q9UKX5 1188 aa15.44■□□□□ 0.06
SKA2-205ENST00000580541 A0A1W2PPC1 479 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 LRRIQ3A6PVS8 624 aaPredicted RBP15.43■□□□□ 0.06
SKA2-205ENST00000580541 PNPLA4P41247 253 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 RBP5P82980 135 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 BIRC3Q13489 604 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 VWA3BQ502W6 1294 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 HSP90AA4PQ58FG1 418 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 C9orf50Q5SZB4 431 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 FIBCD1Q8N539 461 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 GSTCDQ8NEC7 633 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 SLC35C1Q96A29 364 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
SKA2-205ENST00000580541 COLEC11Q9BWP8 271 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 IMPG2Q9BZV3 1241 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 RNF19AQ9NV58 838 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 TBC1D13Q9NVG8 400 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 MSRAQ9UJ68 235 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 RWDD3Q9Y3V2 267 aa15.43■□□□□ 0.06
SKA2-205ENST00000580541 ARHGEF37A1IGU5 675 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 PTGESO14684 152 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 CBFA2T2O43439 604 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 NFICP08651 508 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 MXI1P50539 228 aa15.42■□□□□ 0.06
SKA2-205ENST00000580541 MYO1EQ12965 1108 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms