RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-208	ENST00000578630	GOLGA8IP	A6NC78	632 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	CASTOR2	A6NHX0	329 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	GOLGA8J	A6NMD2	632 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	TRAPPC3	O43617	180 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	EXOC3	O60645	756 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	CYP3A5	P20815	502 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	ZBTB41	Q5SVQ8	909 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	CRELD2	Q6UXH1	353 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	RDH13	Q8NBN7	331 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	BEST2	Q8NFU1	509 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	ERCC4	Q92889	916 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	ZMAT2	Q96NC0	199 aa	Known RBP	12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	CXCL16	Q9H2A7	254 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	KCTD10	Q9H3F6	313 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	TLR9	Q9NR96	1032 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	RBAK	Q9NYW8	714 aa	Predicted RBP	12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	KIAA1468	Q9P260	1216 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	MAPK8IP1	Q9UQF2	711 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	SSX2IP	Q9Y2D8	614 aa		12.52	□□□□□ -0.41
ERBB2-208	ENST00000578630	NCK2	O43639	380 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	B3GAT3	O94766	335 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	CXCL14	O95715	111 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	MBD3	O95983	291 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	PRCP	P42785	496 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	CYP2J2	P51589	502 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	CLCNKB	P51801	687 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	SPAG1	Q07617	926 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	ELAVL2	Q12926	359 aa	Known RBP	12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	TMEM132D	Q14C87	1099 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	NAB2	Q15742	525 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	ZBTB6	Q15916	424 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	UPP1	Q16831	310 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	TIGD5	Q53EQ6	642 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	COBLL1	Q53SF7	1204 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	ISM2	Q6H9L7	571 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	KIAA1841	Q6NSI8	718 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	SLC9A9	Q8IVB4	645 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	BRSK2	Q8IWQ3	736 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	VPS52	Q8N1B4	723 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	MICALL1	Q8N3F8	863 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	TRIML1	Q8N9V2	468 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	TMEM174	Q8WUU8	243 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	FBXL18	Q96ME1	805 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	FNBP1	Q96RU3	617 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	TSG101	Q99816	390 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	NUP62CL	Q9H1M0	184 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	CLSTN2	Q9H4D0	955 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	ENTPD7	Q9NQZ7	604 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	MAN1B1	Q9UKM7	699 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	ADAM28	Q9UKQ2	775 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	TRAF3IP3	Q9Y228	551 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	FRMD4B	Q9Y2L6	1034 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	C2CD2	Q9Y426	696 aa		12.51	□□□□□ -0.41
ERBB2-208	ENST00000578630	PODXL	O00592	558 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	PSMA7	O14818	248 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	B4GALT3	O60512	393 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	NR3C1	P04150	777 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	PAX3	P23760	479 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	ERVFC1	P60507	584 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	ADAM9	Q13443	819 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	SMC1A	Q14683	1233 aa	Known RBP	12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	SNRNP35	Q16560	246 aa	Known RBP	12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	NFIL3	Q16649	462 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	SPATA1	Q5VX52	437 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	JADE1	Q6IE81	842 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	PPM1E	Q8WY54	764 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	RABGGTA	Q92696	567 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	C18orf25	Q96B23	403 aa	Predicted RBP	12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	TCF25	Q9BQ70	676 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	NSUN3	Q9H649	340 aa	Known RBP	12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	MRPL17	Q9NRX2	175 aa	Known RBP	12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	DMAC2	Q9NW81	257 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	NUB1	Q9Y5A7	615 aa		12.5	□□□□□ -0.41
ERBB2-208	ENST00000578630	SF3B1	O75533	1304 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	TMEM189-UBE2V1	I3L0A0	370 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	BIN1	O00499	593 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CETN3	O15182	167 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	MEFV	O15553	781 aa	Predicted RBP	12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	SOD2	P04179	222 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CTSA	P10619	480 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	PTMS	P20962	102 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	DNAJB1	P25685	340 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	LRPAP1	P30533	357 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	MCM4	P33991	863 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CA8	P35219	290 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	TFAM	Q00059	246 aa	Known RBP	12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CAMK1	Q14012	370 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	MORC3	Q14149	939 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	SKIV2L	Q15477	1246 aa	Known RBP	12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CCDC85B	Q15834	202 aa	Predicted RBP	12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	DUOXA2	Q1HG44	320 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	EDRF1	Q3B7T1	1238 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	USP41	Q3LFD5	358 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CEP135	Q66GS9	1140 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	CENPP	Q6IPU0	288 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	FUT10	Q6P4F1	479 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	USP37	Q86T82	979 aa		12.49	□□□□□ -0.41
ERBB2-208	ENST00000578630	TMEM173	Q86WV6	379 aa	Predicted RBP	12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms