RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 GUF1Q8N442 669 aaKnown RBP15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 MICAL1Q8TDZ2 1067 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SMARCE1Q969G3 411 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ZMAT2Q96NC0 199 aaKnown RBP15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PCDHA5Q9Y5H7 936 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 IRAK3Q9Y616 596 aa15.11■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ZNF233A6NK53 670 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 LACTBL1A8MY62 500 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TISP43B9A030 160 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TGFB1I1O43294 461 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TADA2AO75478 443 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 EFEMP2O95967 443 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CTSAP10619 480 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SMC1AQ14683 1233 aaKnown RBP15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 COBLL1Q53SF7 1204 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 GLRA4Q5JXX5 417 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CRELD2Q6UXH1 353 aaPredicted RBP15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TMC7Q7Z402 723 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 BRSK2Q8IWQ3 736 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 NELFCDQ8IXH7 590 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 FBXL18Q96ME1 805 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CDCA3Q99618 268 aaPredicted RBP15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CBWD1Q9BRT8 395 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CXCL16Q9H2A7 254 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 AGPAT3Q9NRZ7 376 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 MARCH5Q9NX47 278 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ADAM28Q9UKQ2 775 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PRG3Q9Y2Y8 225 aaPredicted RBP15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 C2CD2Q9Y426 696 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ANK1P16157 1881 aa15.1■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CASTOR2A6NHX0 329 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 MEFVO15553 781 aaPredicted RBP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SOD2P04179 222 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 LRPAP1P30533 357 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 PPP1R2P41236 205 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ERVFC1P60507 584 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 UPP1Q16831 310 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ZBTB41Q5SVQ8 909 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ZNF658Q5TYW1 1059 aaPredicted RBP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TMEM173Q86WV6 379 aaPredicted RBP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SLC9A9Q8IVB4 645 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 RNF168Q8IYW5 571 aaPredicted RBP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 MRPL43Q8N983 215 aaKnown RBP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 XXYLT1Q8NBI6 393 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 BEST2Q8NFU1 509 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CACTINQ8WUQ7 758 aaKnown RBP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 KIF12Q96FN5 646 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TCF25Q9BQ70 676 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 FAM213AQ9BRX8 229 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 HERC2P3Q9BVR0 1158 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ZBP1Q9H171 429 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 IKZF4Q9H2S9 585 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 KCTD10Q9H3F6 313 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 ENTPD7Q9NQZ7 604 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 HSPBP1Q9NZL4 362 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 TRAF3IP3Q9Y228 551 aa15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNORD3B-1-201ENST00000577988 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 B3GAT3O94766 335 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 CXCL14O95715 111 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 IRS1P35568 1242 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 NFIL3Q16649 462 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 USP41Q3LFD5 358 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 TCEAL5Q5H9L2 206 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 SPATA1Q5VX52 437 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 FUT10Q6P4F1 479 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 MICALL1Q8N3F8 863 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 BCL7CQ8WUZ0 217 aaPredicted RBP15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 FAM212AQ96EL1 285 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 PCIF1Q9H4Z3 704 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 TLE6Q9H808 572 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 LMBRD1Q9NUN5 540 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 COG5Q9UP83 839 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 BRWD1Q9NSI6 2320 aa15.08■□□□□ 0
SNORD3B-1-201ENST00000577988 ATG2AQ2TAZ0 1938 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 TRANK1O15050 2925 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 C1RP00736 705 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 RPL13P26373 211 aaKnown RBP15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 CLCNKBP51801 687 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 CREMQ03060 361 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 SOX4Q06945 474 aaPredicted RBP15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 COL19A1Q14993 1142 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 TMEM132DQ14C87 1099 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 CCDC85BQ15834 202 aaPredicted RBP15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 JADE1Q6IE81 842 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 KIAA1841Q6NSI8 718 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 PDXDC1Q6P996 788 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 SAAL1Q96ER3 474 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 PAAF1Q9BRP4 392 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.07■□□□□ 01e-7■■■■■ 37.6
SNORD3B-1-201ENST00000577988 MRPL17Q9NRX2 175 aaKnown RBP15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 CHST7Q9NS84 486 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 DMAC2Q9NW81 257 aa15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 RBAKQ9NYW8 714 aaPredicted RBP15.07■□□□□ 0
SNORD3B-1-201ENST00000577988 GOLGA8IPA6NC78 632 aa15.06■□□□□ 0
SNORD3B-1-201ENST00000577988 C2orf71A6NGG8 1288 aa15.06■□□□□ 0
SNORD3B-1-201ENST00000577988 GOLGA8JA6NMD2 632 aa15.06■□□□□ 0
SNORD3B-1-201ENST00000577988 PODXLO00592 558 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms