RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 NAB2Q15742 525 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 DCAF4L1Q3SXM0 396 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 ANKS3Q6ZW76 656 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 UROC1Q96N76 676 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 TUFT1Q9NNX1 390 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 DNMT3BQ9UBC3 853 aaKnown RBP12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 BACE2Q9Y5Z0 518 aa12.84□□□□□ -0.35
CTDNEP1-212ENST00000576613 GPR179Q6PRD1 2367 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 ACKR2O00590 384 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 TBC1D4O60343 1298 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 LILRB5O75023 590 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 LRG1P02750 347 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 RHOP08100 348 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 ELF1P32519 619 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 NAMPTP43490 491 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 ADCY1Q08828 1119 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 PPP2R5AQ15172 486 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 NELL1Q92832 810 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 TNFRSF25Q93038 417 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 MCRS1Q96EZ8 462 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 NACC1Q96RE7 527 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 AVENQ9NQS1 362 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 HEBP1Q9NRV9 189 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 GDAQ9Y2T3 454 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 NOTCH4Q99466 2003 aa12.83□□□□□ -0.36
CTDNEP1-212ENST00000576613 EPG5Q9HCE0 2579 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 A0A087WWV3 80 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 TTLL13PA6NNM8 815 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 PRRG1O14668 218 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 PTPN2P17706 415 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 LIG1P18858 919 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 CLCNKBP51801 687 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 EFNA5P52803 228 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 NRLP54845 237 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 TRIM29Q14134 588 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 ANKRD1Q15327 319 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 CATSPER3Q86XQ3 398 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 IER2Q9BTL4 223 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 CCDC113Q9H0I3 377 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 GMEB2Q9UKD1 530 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 RAB23Q9ULC3 237 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 TPCN1Q9ULQ1 816 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 USP18Q9UMW8 372 aa12.82□□□□□ -0.36
CTDNEP1-212ENST00000576613 ARHGEF37A1IGU5 675 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 MAN2B1O00754 1011 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 ZNF197O14709 1029 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 CTDNEP1O95476 244 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 CEBPBP17676 345 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 TKTP29401 623 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 ATXN1P54253 815 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 MTAPQ13126 283 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 UPP1Q16831 310 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 SLC5A9Q2M3M2 681 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 GLRA4Q5JXX5 417 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 SLC8B1Q6J4K2 584 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 DIS3L2Q8IYB7 885 aaKnown RBP12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 ZNF461Q8TAF7 563 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 ERMNQ8TAM6 284 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 CNTNAP3BQ96NU0 1288 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 RTKNQ9BST9 563 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 CNTNAP3Q9BZ76 1288 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 CXCL16Q9H2A7 254 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 BRD9Q9H8M2 597 aa12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 TOPORSQ9NS56 1045 aaPredicted RBP12.81□□□□□ -0.36
CTDNEP1-212ENST00000576613 KMT2BQ9UMN6 2715 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 BTBD18B2RXH4 712 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 DTNBO60941 627 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 MICAL2O94851 1124 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 CYP11B2P19099 503 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 YARSP54577 528 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 ROR1Q01973 937 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 ATF7IP2Q5U623 682 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 EEF1DP3Q658K8 133 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 TANGO2Q6ICL3 276 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 ELMOD1Q8N336 334 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 BSNDQ8WZ55 320 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 IRF7Q92985 503 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 CORO1BQ9BR76 489 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 POLR3CQ9BUI4 534 aaPredicted RBP12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 TRMT61BQ9BVS5 477 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 PLA2G2FQ9BZM2 168 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 ZFP14Q9HCL3 533 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 SLC38A7Q9NVC3 462 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 NDRG2Q9UN36 371 aaKnown RBP12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 CACNA1BQ00975 2339 aa12.8□□□□□ -0.36
CTDNEP1-212ENST00000576613 WDR27A2RRH5 827 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms