RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
CTNS-208ENST00000574218 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
CTNS-208ENST00000574218 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
CTNS-208ENST00000574218 USP24Q9UPU5 2620 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 CNOT1A5YKK6 2376 aaKnown RBP13.19□□□□□ -0.3
CTNS-208ENST00000574218 A0A1B0GUA9 196 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 M0R2N6 131 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 PRRG1O14668 218 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 ZNF197O14709 1029 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 ADAM12O43184 909 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 TRAPPC3O43617 180 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 TGM1P22735 817 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 GLRA2P23416 452 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 GRM2Q14416 872 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 TANGO2Q6ICL3 276 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 PRR23CQ6ZRP0 262 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 FAM3CQ92520 227 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 TRMT61BQ9BVS5 477 aaKnown RBP13.19□□□□□ -0.3
CTNS-208ENST00000574218 AGXT2Q9BYV1 514 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 PLA2G2FQ9BZM2 168 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 C2orf40Q9H1Z8 148 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 LMAN1LQ9HAT1 526 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 SNTG2Q9NY99 539 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 MTRRQ9UBK8 725 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
CTNS-208ENST00000574218 CITO14578 2027 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 ZBTB39O15060 712 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 RECQL4O94761 1208 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 CEBPBP17676 345 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 ARL2P36404 184 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 CXCL12P48061 93 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 IRX6P78412 446 aaPredicted RBP13.18□□□□□ -0.3
CTNS-208ENST00000574218 SPIRE1Q08AE8 756 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 CSRP2Q16527 193 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 ANKS3Q6ZW76 656 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 CORO1BQ9BR76 489 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
CTNS-208ENST00000574218 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 ANGPTL2Q9UKU9 493 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 COL4A2P08572 1712 aa13.18□□□□□ -0.3
CTNS-208ENST00000574218 CHD6Q8TD26 2715 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
CTNS-208ENST00000574218 CDKL5O76039 1030 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 B3GAT3O94766 335 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 SLITRK3O94933 977 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 FGFR3P22607 806 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 GDI1P31150 447 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 CNR2P34972 360 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 PRPF4BQ13523 1007 aaKnown RBP13.17□□□□□ -0.3
CTNS-208ENST00000574218 LRRC32Q14392 662 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 AASDHQ4L235 1098 aaPredicted RBP13.17□□□□□ -0.3
CTNS-208ENST00000574218 CYP4A22Q5TCH4 519 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
CTNS-208ENST00000574218 CEP68Q76N32 757 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 MAEAQ7L5Y9 396 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 APBB1IPQ7Z5R6 666 aaPredicted RBP13.17□□□□□ -0.3
CTNS-208ENST00000574218 CSGALNACT1Q8TDX6 532 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 HAS1Q92839 578 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 UROC1Q96N76 676 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 EIF2AK1Q9BQI3 630 aaKnown RBP13.17□□□□□ -0.3
CTNS-208ENST00000574218 BACE2Q9Y5Z0 518 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
CTNS-208ENST00000574218 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 PTGESO14684 152 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 ZNF263O14978 683 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 PSMC3P17980 439 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 LIG1P18858 919 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 HSPA4P34932 840 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 RBM25P49756 843 aaKnown RBP13.16□□□□□ -0.3
CTNS-208ENST00000574218 STK3Q13188 491 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 FZD5Q13467 585 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 MAPK6Q16659 721 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 IQCEQ6IPM2 695 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 POTEHQ6S545 545 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 YAF2Q8IY57 180 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 FAM200AQ8TCP9 573 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 DEPDC1BQ8WUY9 529 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 KCNB2Q92953 911 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 MSANTD3Q96H12 275 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 AIFM3Q96NN9 605 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
CTNS-208ENST00000574218 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
CTNS-208ENST00000574218 PCDHA12Q9UN75 941 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
CTNS-208ENST00000574218 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
CTNS-208ENST00000574218 ARHGEF37A1IGU5 675 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 CHURC1-FNTBB4DL54 471 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 LYPLA2O95372 231 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 PRKCBP05771 671 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 TDGF1P13385 188 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 TKTP29401 623 aaKnown RBP13.15□□□□□ -0.3
CTNS-208ENST00000574218 FNTBP49356 437 aa13.15□□□□□ -0.3
CTNS-208ENST00000574218 RARRES1P49788 294 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms