RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 HOXD13P35453 343 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 SURF1Q15526 300 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 ENOX2Q16206 610 aaKnown RBP13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 DDX53Q86TM3 631 aaKnown RBP13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 C12orf56Q8IXR9 622 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 MICALL1Q8N3F8 863 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 SAAL1Q96ER3 474 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 NGRNQ9NPE2 291 aaKnown RBP13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 ENTPD7Q9NQZ7 604 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 RBAKQ9NYW8 714 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 HSPBP1Q9NZL4 362 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 SSX2IPQ9Y2D8 614 aa13.87□□□□□ -0.19
TRAPPC1-206ENST00000573989 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 TULP1O00294 542 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 CLIC2O15247 247 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 TGFB1I1O43294 461 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 TRAPPC3O43617 180 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 CYP2J2P51589 502 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 TMEM132DQ14C87 1099 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 NAB2Q15742 525 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 COBLL1Q53SF7 1204 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 ZBTB41Q5SVQ8 909 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 DCLRE1AQ6PJP8 1040 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 BEST2Q8NFU1 509 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 CACTINQ8WUQ7 758 aaKnown RBP13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 NSUN3Q9H649 340 aaKnown RBP13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 ADAM28Q9UKQ2 775 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 C2CD2Q9Y426 696 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 TRANK1O15050 2925 aa13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 SF3B1O75533 1304 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAPPC1-206ENST00000573989 MYO7AQ13402 2215 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 GOLGA8IPA6NC78 632 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 GOLGA8JA6NMD2 632 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 TMEM189-UBE2V1I3L0A0 370 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 NCK2O43639 380 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 B4GALT3O60512 393 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 EXOC3O60645 756 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 B3GAT3O94766 335 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 MBD3O95983 291 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 RPL13P26373 211 aaKnown RBP13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 CA8P35219 290 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 MYBPC2Q14324 1141 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 SMC1AQ14683 1233 aaKnown RBP13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 SNRNP35Q16560 246 aaKnown RBP13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 CAMK4Q16566 473 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 JADE1Q6IE81 842 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 KIAA1841Q6NSI8 718 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 CRELD2Q6UXH1 353 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 SLC9A9Q8IVB4 645 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 VPS52Q8N1B4 723 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 TRIML1Q8N9V2 468 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 ERCC4Q92889 916 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 ZMAT2Q96NC0 199 aaKnown RBP13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 TSG101Q99816 390 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 TCF25Q9BQ70 676 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 NUP62CLQ9H1M0 184 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 CXCL16Q9H2A7 254 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 KCTD10Q9H3F6 313 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 KIAA1468Q9P260 1216 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 MAPK8IP1Q9UQF2 711 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 TRAF3IP3Q9Y228 551 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 FRMD4BQ9Y2L6 1034 aa13.85□□□□□ -0.19
TRAPPC1-206ENST00000573989 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 PODXLO00592 558 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 PSMA7O14818 248 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 CSPG5O95196 566 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 SOD2P04179 222 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 URODP06132 367 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 PAX3P23760 479 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 CLCNKBP51801 687 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 UPP1Q16831 310 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 USP41Q3LFD5 358 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 FUT10Q6P4F1 479 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 USP37Q86T82 979 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 TMEM173Q86WV6 379 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 FNBP1Q96RU3 617 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 CLSTN2Q9H4D0 955 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 MAN1B1Q9UKM7 699 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 R3HCC1Q9Y3T6 440 aaKnown RBP13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 NUB1Q9Y5A7 615 aa13.84□□□□□ -0.19
TRAPPC1-206ENST00000573989 FSCN2O14926 492 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 NR3C1P04150 777 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 TMEM191BP0C7N4 346 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 CTSAP10619 480 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 PTMSP20962 102 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 DNAJB1P25685 340 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 LRPAP1P30533 357 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 PRCPP42785 496 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 ERVFC1P60507 584 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 CREMQ03060 361 aa13.83□□□□□ -0.2
TRAPPC1-206ENST00000573989 SPAG1Q07617 926 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms